Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03255 ATGACTCTCGGTTCCTCGCGAATCATGGCCAATTTTTCCTCCACAGCTTCCAATCAGATTCGCTTCCTGCTCAACTCCTTGAACGAAGTCAACTTTGACTCCGTTCTCCAGCAACTTTCTCAGTTCACTGAATTTGGAACCGTTGGATGCATTTTGCTACTCCAAACTTGCTTGGATCACTTTAATTATGTCAGAAGAGATAGAAAAGATATGCAACATGAGCCAATTCTTGCGGCAGTAGTTAAGTACCTCTTGGATAAACCAAACTTCAGCACAGTGTTTTCCGAGTCAATGAAGAATGTAGACATTAATGAAAGCTTTCTGGAAAGCTTTTGCAATGGATTACATCTCTCTTTATTGGAGAAAATTGCCGTCAGTGTTGCATTATCTGATTCTGAAAATCCCGATGCCAGGCTATGTGGCAAGAATTTTTGCATGACTCAGATTGAAGAGTTGTATGCCAATCCTGGTTCTCTGAGTTTCCATGAGCAAATTCACAGTGTTATCATGTTCCTCAAGCAGTCCGAGGGTCTCTCTGAGCATGTAGATTCCTTTATGCAGATATTGTCGCTGGTGCAGTTCAATGACACACCACCTTTTGTTTTGACCCCGATGCTACCCGACGAGATGCATGGGGCTGATTTTTTGAGGTGGAATATGGAGTTCATCCATGAGAGTGAAGAAAATGATTTTGATGCTATTTTGGCAGACATACAGAAGGAAATGAACATGGGGGATCTTGTGAAGGAACTAGGTTATGGATGCACAGTTGATGTCTCACAGTGCAAGGAAGTATTGTCACTCTTCTTACCTTTAACGGATAATATGCTCTCTAAATTACTTGGTGCTATTGCACACTCTCATGCTGGGCTGGAGGATAACCAGAGCACATTCTTAACTTTCGGCTCAGCCCTTGGATATAATAACTTGTCCGAGTTACCTCCACTTAACTCTTGGAATATTGATGTGTTGATAGATACGGTCAAAAGTCTTGCACCACAAACCAATTGGGTCCGTGTTATTGAAAATCTTGATCATGAAGGATTTTACCTTCCCAGTGAAGAGGCATTCTCTTTTCTTATGTCTGTTTATAAGCATGCTTGTAAGGAACCATTTCCTCTCCGCGCCGTCTGCGGATCTGTCTGGAAGAATACTGAGGGTCAGCTGTCTTTTCTTAAATATGCTGTAACCGCACCGCCAGAAATGTTTACATTTGCGCACTCTGCGAGGCAACTGGCATATGCTGATGCAATTCATGGCCACAAGCTTCAAAATGGACATGCAAATCATGCCTGGCTGTGTATTGACCTTTTGGATGTCCTATGCCAGCTAGCTGAGAAGGGTCATGCCAGTGTTGTTTGGTCAATCCTGGATTATCCCCTTAAACACTGTCCAGAAATATTGCTTCTTGGGATGTCCCATGTTAATACTACTTACAACCTCTTCCAGCGAGAAGTATCTCTGATTGTTTTTCCCATGATAGTAAAAAGTGATGTTGGTAGTGGAATGATTCTACACCTTTGGTACATAAATCCCAATCTGGTCCTGCGAGGCTTTATGGATTCTCAAAACGATGATGTAGGCAGCATTGTGAGAATTGTAGACCTCTGCCAAGAGCTTAAGATTCTATTACCTGTGGTGGAAGTTATTCCCTATTATTATAGTATAAGGTTAGCGGCTGTTGCTTCAAGAAAAAATATTCTTGACCTTGAGAAGTGGTTGAGTAACAATTTAACTACATACAAGGATGCCTTCTTTGAGGAGTGCCTAAAGTTTTTGAAGGAAGTCCAAGCTGTCGGATCACATAATTTATCTGACCAATCTTTTCATCTGTCTGTTGGTGTTCTGAGTTTCTTTACTGATACAACTGCTATATTCTTGAAGGTTCTCAAGTCTCATACTGACTTGGTTACCTCTGGACTACTTTCTGAGGAGCTGGAGAGTTTGCATATATCTATTATAGATTCAAATCCAAGACTTCAAAATAGCGAGACTACTGATTCACCTACTTCTACACAATTTCCAATTGATGTTGAAGATGAAGCAAACGCGATCTTCCAAGAGATGTTTCATGAAAAGATATCCATCCCTCTAGTGGTGCAAAGACTAATCCGATTCAGCGAATCTTCTGTGAAGAGAGACAATTTGATTTTTGAATGCATGGTTGCAAACTTGTTTGAGGAGTATAAGTTTTACCCAAGGTATCCAGAAATGCAACTCAAAATTGCCGGACTTATCTTTGGTTGTGTGATTAAGCATCGTCTTGTGACACATCTCTCTCTTGGGATAGCTCTTCGATATGTTCTTGATGCATTGCGCAAGCCTGCGGATTCTAAAATGTTTATGTTCGGAAGTTTGGCACTGGAGCAATTTGTGGATCGTCTTATTGAGTGGCCTCAGTATTGCAATCACATTTTGCAAATTTCCCATATGCGCAGCACACATTCCGAAATAGTTGCTTTCATCGAACAGGCTCTGGCTAGGATATCCTCTGGTCATACTGATGTAGATGGGACAACTCATTCTTCTGCTGTTATCAGTAACCATAGTTCTGCACAAGCAACATTAGGTCATGTAGAGCTCAGCGGCTCCAGCATCATACAACCTGGGCAGCAGCATTTGTCAATGCAGCTTCAACAGAGACGTGAGAATTCTCTGGATGATTCTCACAAGACCTCTGTTGGTTCATCGACTGATATGAAACCTCCGTTAGCTTCTCTAGGGCAATCTTCAGTGATTATACCGGCTGATACTTCTAGTGGCAATAAGTTACATAACACAGTCAGTGCCTCGTCAATGTTGTCTTCTTCTTCTGGTTTTGTTCGTCCGTCTCGTGGAACCACTTCTGCCAGGTTTGGATCTGCCTTGAATATTGAAACTTTGGTCGCTGCTGCAGAGAAAAGAGAAACTCCTATTGAGGCTCCAGGGTCAGAGGTTCAAGACAAGATATCGTTCCTAATTAATAATATAGCTTCTACTAATAGCGAAGCCAAAGCAAAAGAGCTCACTGAAATTTTGAAAGAGCAGTACTATCCATGGTTTGCACAGTATATGGTCATGAAAAGAGCAAGCATTGAGCCAAATTTCCATGACATGTACCTGAAATTCTTAGACAAAGTTAATTCAAAGGCTTTGAACAGAGCGATTATCCTGGCAACATATGAAAATTGCAAGGTTCTTTTAGGATCCGAACTTATAAAATCCAGTTCAGAAGAGCGCTCTTTGCTTAAGAATCTGGGCAGCTGGCTTGGAAAGTTGACTATTGGACGGAATCAAGTTTTGAGGGCTCGTGAAATAGATCCGAAATCTTTGATTATAGAGGCATATGAGAAGGGGCTGATGATTGCTGTTATTCCATTTACTTCAAAGGTCCTTGAACCATGCCAAAACAGTCTTGCATATCAGCCCCCTAATCCTTGGACCATGGGCATTTTAGGATTGCTTGCTGAAATTTATTCAATGCCAAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTTTATACAAAAATCTTGGCGTGGATATGAAGGATGTGACACCAACTTCTCTCCTGAAGGATTGTAAAAGAGAAATTGAAGGAAACCCTGATTTCTCTAATAAAGATGTTGGAGCATCATCACAGATGATTTCTGATATAAAATCCAGCCTTGTTCCTCCAGTAAATCAAGTAGAGCTACCACTTGAAGTCACCAATCCATCCAATAGCGGGGCTCATCCACATATGATGTCTCAGTATGCTGGCCCACTTCATATTTCCTCGGGAACATTGATGGAAGATGAGAAAGTAGCACCTCTGAGCTTATCTGATCAATTACCTTCTGCTCAAGGATTGTTACAGGCAAATACTGCTCCAGCACCTTTCCAGCTCCCAACACCCATGCATGCTATAGGAACTCATGTTATTATAAATCCTAAGCTCAGTAGTTTTGGGTTACAGGTTCATTTTCAAAGAGCGGTACCTATTGCAATGGACAGAGCCATCAAAGAAATAGTGTCCAGTATTGTGCAACGCAGCGTTTCCATAGCTACCCAGACAACAAAGGAACTTGTTTTAAAGGATTATGCAATGGAATCAGATGATAAACGTATTAAAAATGCGTCACACTTGATGGTTGCTAGTTTGTCTGGGAGTTTGGCTCATGTGACATGCAAAGAACCTTTACGGGCATCAATATCAAATCAACTGAAGACTTCACTTCAGAGTTTAAATATCGGAAACGAAATTTTGGAACAAGCTGTGCAACTTGTTACCAATGATAATCTAGATCTTGGTTGTGCAGTCATTGAAAAAGCTGCCACTGATAAGGCAATAAAAACCATCGATGCAGAGATTATTCAACAACTTTCTTTGAAAAAGAAGCAGCGAGAAGGTATGGGTTCTACATTTTTTGATGCAAACTTGTATCCACAAGGTTCTATGGTTGGTGTTCCCGAGCCCCTTCGCCCTAAACCTGGTCAGTTGTCCCCGTCGCAACAACGTGTCTATGAGGACTTTGTTCGGCTTCCTTGGCAAAGTCACTCTAGCCAGAATTCACATTCAATGTCCGCAAGTGTTTCTGTTCAATCTGCTAATAGTGGTATTACTGGCACCAGTGCTCCTGCTTCAGGACAGATAAACCCTGGCTACTCTCTAACCACAGGATACGAGGGGCTCTCTCGACCAATAGATGATATGCCAGAACCTAATTTTACTCCACATCATAGTGCTTCCTCAATTAACATTAGAGCAGCCGACAGTGTTTCCCAGCATAGTATGGAGAAAGACTCTGTTGCCTCGTTTCCTTCAACTGCTTCCACCCCTGAGTTGCACGCTGTGGATTCTTCAGATGCTGGGAAAGAATCTGGAGCTTCTTCACAACCACTGGTTTCATCAGGTGCCGTGGAGCGCATTGGAAGTAACTTCTTGGAATCATCTCTCTCTACGAGGGATGCTCTGGATAAATACCAAATTGTTGCACAAAAGTTGGAGGCTCTGGTCAACAATGATTCGAGGGAGGCAGAAATACAGGGAGTTATTTCTGAGGTACCTGAAATCATACTCAGATGTGTTAGTCGAGATGAAGCAGCTTTAGCTGTGGCTCAAAAGGTTTTCAAGGGTTTATACGACAATGCTTCAAATAGCGTTCATGTCTATGCGTACCTTGCAATCCTGACTGCCATTCGTGATGTTTGCAAGCTTGCTGTCAAGGAGCTTACTAGTTGGGTAATTTACTCGGATGAAGAGAGGAAATACAACAAAGATATCACTGTTGGTCTCATCCGCAGTGAACTACTAAATCTAACCGAGTATAATGTTCACATGGCAAAACTTATTGACGGGGGAAGAAACAAGGCTGCTACGGAGTTTTCAATCTCTCTTCTTCAAACCCTGGTCATTGAGGAACCAAAAGTTGTTTCCGAACTTCACAATCTTATCGATGCTTTGGCAAAGCTTGCTACAAAGCCTGGATACCCCGAATCATTGCAACAACTCATTGAGATGATCAAAAATCCTGTTGCTTTATCTGCTATTAATGCTGGAAAGGAGGATAAATCGAGGCAATCAAGAGACAATAAGGGTCCTAGTCTGCTAGTTGCAAACAGGGAAGAGTTAAACATTGTAGATTCTGCCAAACCTGATCCTGCTGGATTCCGTGAGCAGGTGTCCATGTTGTTTGCTGAATGGTATAGGATATGTGAACTTCCTGGTGCCAATGATACATCTGCTACCCACTTCATCGTACAATTGCATCAGAGTGGGCTGCTTAAGGGGGATGATATGACAGATCGATTTTTTCGTTTGTTAATGGAAATCGCAGTTGCACATTGCTTATCCACTGAGGGGATTAATTCAGGGGCACCACAATCTCCTCAACAAATGCTGTCAATGTCATTTCTCGCAATTGATATTTATGCAAAGCTTGTCTTCTCTATCTTGAAGGGATCAAGCAAACTCTTTCTTCTCTCCAAGATTCTAGCGGTTACTGTCAGATTCATTGTAAAAGATGCAGAGGAGAAGAAAGTCTCTTTTAATCCAAGACCCTATTTCAGACTGTTCATCAACTGGCTTCTAGATCTTGGCTCACTTGAGCCTGTTACTGATGGTGCAAATCTCCAGATTTTGACTGGTTTTGCCAATGCATTTCATGCTCTACAGCCACTCAAAGTTCCTGGATTCAGTTTTGCTTGGCTGGAGTTGGTTAGTCACAGGAGCTTCATGCCAAAAATGCTGACTGGTAACCTTCAAAAAGGTTGGCCTTATATCCAAAGGTTGCTTGTAGATTTGTTCCAATTTATGGAGCCTTTTCTGAGGCATGCCGAGCTAGGAGATCCGGTCCGTGTTCTCTACAAGGGAACACTTAGGGTGCTCTTGGTGCTACTTCATGACTTCCCAGAGTTCCTTTGTGACTATCACTTTACCTTTTGTGATGTGATCCCTCCAAGTTGCATACAGATGCGAAATATTATTCTAAGTGCATTTCCGCGTAGTATGAGGCTGCCAGACCCTTCAACTCCAAATTTGAAGATTGATTTGCTTCAAGAAATAACTCAATCCCCTCGTATTCTTTCTGAGGTTGATGCAGCATTGAAAGCAAAGCAGATGAAGACTGACATAGATGAATACCTTCAGACAAGGGAACAGCCTTCTCCACTTTTATCTGAATTAAAAGAGAAGCTGCTACTCTCACCAAATGAAGCTGCCTCTGCCGGCACTCGTTACAATGTGCCTTTAATCAACTCCCTTGTACTGCATGTTGGAATGCAGGCAATCGAGCAGCTCAAGGCACGAGCTCCCCATGCACAATCACCACAAACTACATATGGACTGGCTGTATTTTCTGTTGGCGCTGCTTTGGATATTTTCCAGACTTTAATCGTTGACTTGGATACAGAAGGGCGCTACCTTTTCCTAAATGCTGTCGCTAACCAACTGCGTTATCCCAATACTCACACACACTACTTTTCCTTCGTCATCCTTTACTTGTTTGCAGAATCAAACCAGGAAATTATCCAAGAACAAATTACAAGAGTCTTGCTTGAACGCCTTATTGTAAATCGACCTCATCCTTGGGGCCTCCTCATTACTTTCATTGAGCTCATCAAGAATCTAAGGTATAATTTCTGGAACCGGTCTTTCATAAGATGTGCACCAGAGATTGAAAAACTTTTTGAATCAGTCTCAAGATCTTGTGGAGGTCCAAAACCAGTGGAAGAGAGTATGGTTTCGGGTTGGGTCTGA 7221 0.4206 MTLGSSRIMANFSSTASNQIRFLLNSLNEVNFDSVLQQLSQFTEFGTVGCILLLQTCLDHFNYVRRDRKDMQHEPILAAVVKYLLDKPNFSTVFSESMKNVDINESFLESFCNGLHLSLLEKIAVSVALSDSENPDARLCGKNFCMTQIEELYANPGSLSFHEQIHSVIMFLKQSEGLSEHVDSFMQILSLVQFNDTPPFVLTPMLPDEMHGADFLRWNMEFIHESEENDFDAILADIQKEMNMGDLVKELGYGCTVDVSQCKEVLSLFLPLTDNMLSKLLGAIAHSHAGLEDNQSTFLTFGSALGYNNLSELPPLNSWNIDVLIDTVKSLAPQTNWVRVIENLDHEGFYLPSEEAFSFLMSVYKHACKEPFPLRAVCGSVWKNTEGQLSFLKYAVTAPPEMFTFAHSARQLAYADAIHGHKLQNGHANHAWLCIDLLDVLCQLAEKGHASVVWSILDYPLKHCPEILLLGMSHVNTTYNLFQREVSLIVFPMIVKSDVGSGMILHLWYINPNLVLRGFMDSQNDDVGSIVRIVDLCQELKILLPVVEVIPYYYSIRLAAVASRKNILDLEKWLSNNLTTYKDAFFEECLKFLKEVQAVGSHNLSDQSFHLSVGVLSFFTDTTAIFLKVLKSHTDLVTSGLLSEELESLHISIIDSNPRLQNSETTDSPTSTQFPIDVEDEANAIFQEMFHEKISIPLVVQRLIRFSESSVKRDNLIFECMVANLFEEYKFYPRYPEMQLKIAGLIFGCVIKHRLVTHLSLGIALRYVLDALRKPADSKMFMFGSLALEQFVDRLIEWPQYCNHILQISHMRSTHSEIVAFIEQALARISSGHTDVDGTTHSSAVISNHSSAQATLGHVELSGSSIIQPGQQHLSMQLQQRRENSLDDSHKTSVGSSTDMKPPLASLGQSSVIIPADTSSGNKLHNTVSASSMLSSSSGFVRPSRGTTSARFGSALNIETLVAAAEKRETPIEAPGSEVQDKISFLINNIASTNSEAKAKELTEILKEQYYPWFAQYMVMKRASIEPNFHDMYLKFLDKVNSKALNRAIILATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKVLEPCQNSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLYKNLGVDMKDVTPTSLLKDCKREIEGNPDFSNKDVGASSQMISDIKSSLVPPVNQVELPLEVTNPSNSGAHPHMMSQYAGPLHISSGTLMEDEKVAPLSLSDQLPSAQGLLQANTAPAPFQLPTPMHAIGTHVIINPKLSSFGLQVHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDDKRIKNASHLMVASLSGSLAHVTCKEPLRASISNQLKTSLQSLNIGNEILEQAVQLVTNDNLDLGCAVIEKAATDKAIKTIDAEIIQQLSLKKKQREGMGSTFFDANLYPQGSMVGVPEPLRPKPGQLSPSQQRVYEDFVRLPWQSHSSQNSHSMSASVSVQSANSGITGTSAPASGQINPGYSLTTGYEGLSRPIDDMPEPNFTPHHSASSINIRAADSVSQHSMEKDSVASFPSTASTPELHAVDSSDAGKESGASSQPLVSSGAVERIGSNFLESSLSTRDALDKYQIVAQKLEALVNNDSREAEIQGVISEVPEIILRCVSRDEAALAVAQKVFKGLYDNASNSVHVYAYLAILTAIRDVCKLAVKELTSWVIYSDEERKYNKDITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVVSELHNLIDALAKLATKPGYPESLQQLIEMIKNPVALSAINAGKEDKSRQSRDNKGPSLLVANREELNIVDSAKPDPAGFREQVSMLFAEWYRICELPGANDTSATHFIVQLHQSGLLKGDDMTDRFFRLLMEIAVAHCLSTEGINSGAPQSPQQMLSMSFLAIDIYAKLVFSILKGSSKLFLLSKILAVTVRFIVKDAEEKKVSFNPRPYFRLFINWLLDLGSLEPVTDGANLQILTGFANAFHALQPLKVPGFSFAWLELVSHRSFMPKMLTGNLQKGWPYIQRLLVDLFQFMEPFLRHAELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKTDIDEYLQTREQPSPLLSELKEKLLLSPNEAASAGTRYNVPLINSLVLHVGMQAIEQLKARAPHAQSPQTTYGLAVFSVGAALDIFQTLIVDLDTEGRYLFLNAVANQLRYPNTHTHYFSFVILYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNLRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVEESMVSGWV 2406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03255 2406 FunFam Transcription regulator 1867 2160 - -
Vivi7g03255 2406 FunFam Ccr4-Not transcription complex subunit 945 1193 - -
Vivi7g03255 2406 Coils Coil 1646 1666 - -
Vivi7g03255 2406 MobiDBLite consensus disorder prediction 871 905 - -
Vivi7g03255 2406 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1315 1456 IPR024557 -
Vivi7g03255 2406 Gene3D - 1866 2160 - -
Vivi7g03255 2406 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 36 2395 IPR040398 GO:0017148|GO:0030015
Vivi7g03255 2406 Pfam CCR4-Not complex component, Not1 2018 2387 IPR007196 -
Vivi7g03255 2406 FunFam CCR4-NOT transcription complex subunit 1 2157 2386 - -
Vivi7g03255 2406 MobiDBLite consensus disorder prediction 890 905 - -
Vivi7g03255 2406 MobiDBLite consensus disorder prediction 1525 1624 - -
Vivi7g03255 2406 Gene3D - 661 831 IPR038535 -
Vivi7g03255 2406 FunFam Transcription regulator 664 832 - -
Vivi7g03255 2406 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 489 630 IPR032194 -
Vivi7g03255 2406 MobiDBLite consensus disorder prediction 1565 1604 - -
Vivi7g03255 2406 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 972 1191 IPR032191 -
Vivi7g03255 2406 CDD NOT1_connector 1639 1830 - -
Vivi7g03255 2406 MobiDBLite consensus disorder prediction 1525 1547 - -
Vivi7g03255 2406 Gene3D - 944 1193 - -
Vivi7g03255 2406 Gene3D - 2161 2392 - -
Vivi7g03255 2406 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 659 828 IPR032193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03255 K12604 - gmx:100783935 3969.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03255 7 97977184 97997042 Vivi7g03255 7 97977184 97997042 ECH