Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03254 ATGAAAATGTTGACAAAGTTTTGTTTTTTATGGTGTCTTTGGATTTTTCTATGTGGGTCTTGTTGTATGGGAAGATTTGTGGTAGAAAAAAACAATTTGAAAATCACTTCTCCCAAATCATTGAGAGGTGTTTATGAATGTGCAATTGGGAATTTTGGGGTTCCTAAATATGGTGGAACCATGATTGGAACAGTTGTGTACCCTAAGTTTAATCAGAATGGATGCCACAAATTTAATGATGCTGATACTTCCTTGAGTTCCAAGCCTGGAAGCTTTCCTTCCTTTGTTCTTGTTGATCGCGGAGATTGTTACTTCACTTTGAAGGCATGGAATGCTCAGATGGGTGGAGCAGCAGCGATTCTTGTTGCAGATGACAGGGTAGAACCATTGATCACCATGGACACTCCTGAAGAAGGGACTGGTGGTAACGCTGATGATTATATTGAAAAGATTACAATTCCGTCGGCTCTTATCAGCAAATCACTCGGGGACAGTATCAAGAAGGCTCTCTCAAGTGGAGGAATGGTGAACGTAAATCTCGATTGGAGAGAAGCACTTCCACACCCTGACGAGAGAGTTGAATATGAGTTATGGACGAGTAGTAACGACGAGTGTGGTCCAAAATGTGAGAGCGAAATGAATTTTTTGAAGAGTTTTAAAGGCGCGGCTCAATTACTTGAGCAAAAAGGGTACACTCGGTTTACGCCTCATTATATAACTTGGTATTGTCCAGAAGCATTCATCTTAAGCCAACAGTGTAAAGCTCAGTGCATTAATAACGGGAGGTACTGTGCGCCTGATCCCGAACAAGATTTCAGTAGAGGGTATGATGGGAAAGATGTTGTTGTTCAAAATTTGCGCCAAGCTTGCTTCTTTAAAGTTGCAAATGATAGTGGTAAGCCTTGGCAATGGTGGGATTATGTTACCGACTTTGCAATCCGATGTCCAATGAGAGGACATAGATACACTGAAGAATGCTCGGATCAAGTTGTTCAATCTCTTGGTGTTGATTTAAAAAAAATTAAAGAATGCATAGGGGATCGCAATGCAGATGTTGAAAATCCTATCCTTAAGGCTGAACAGGATGCACAGATTGGACAGGGTACTCGTGGAGATGTTACAATACTACCTACTCTTGTTATAAACAACAGACAATATAGAGGTATGCTGTCGAAAGCAGCGGTATTGAAAGCAATCTGCGCAAGTTTCCAAGAGACAACTGAGCCATCAATTTGTTTAACTCCAGACATGGAAACAAATGAGTGTTTGGTGAACAATGGTGGTTGTTGGCAAGACAAAACTGCCAACATTACAGCATGCAGGGACACTTTCCGCGGAAGAATATGCGAGTGCCCTATTGTACAAAATGTGAAGTTTGTTGGTGATGGATATACTCATTGCGAAGCTAGTGGACCTTTGCGGTGTGCAGTCAACAACGGAGGTTGTTGGCAGGGAACCCAAGGCGGTCGGTCTTACTCTGCTTGTATCGACGATCATACAAAAGGTTGTAAGTGTCCGCATGGATTCAGGGGCGACGGAGTCCACTCATGTGAAGATGTGGATGAGTGCAAAGAGAAATTGGCATGCCAGTGCCCAGAGTGCAGCTGCAAAAACACCTGGGGGAGTTATGAATGCTCGTGTAGTAACGGTTTGTTCTATATGCGGGAAAGTGACATGTGTATTGGCAAATATAGCGCTTCAGTGTCGAATGGGGGATTTGTTTGGATGCTTATACTGATATTAGGTATTGGTGGCACTGGCGGATATGCATTCTACAAGTACAGAATCCAGAGATACATGGATTATGAGATAAGAGCGATAATGGCGCAATATATGCCGTTGGATAATCAACCGGAGAACTTAAATCAAGTTCAGCATGCTGTGTAG 1887 0.4255 MKMLTKFCFLWCLWIFLCGSCCMGRFVVEKNNLKITSPKSLRGVYECAIGNFGVPKYGGTMIGTVVYPKFNQNGCHKFNDADTSLSSKPGSFPSFVLVDRGDCYFTLKAWNAQMGGAAAILVADDRVEPLITMDTPEEGTGGNADDYIEKITIPSALISKSLGDSIKKALSSGGMVNVNLDWREALPHPDERVEYELWTSSNDECGPKCESEMNFLKSFKGAAQLLEQKGYTRFTPHYITWYCPEAFILSQQCKAQCINNGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFFKVANDSGKPWQWWDYVTDFAIRCPMRGHRYTEECSDQVVQSLGVDLKKIKECIGDRNADVENPILKAEQDAQIGQGTRGDVTILPTLVINNRQYRGMLSKAAVLKAICASFQETTEPSICLTPDMETNECLVNNGGCWQDKTANITACRDTFRGRICECPIVQNVKFVGDGYTHCEASGPLRCAVNNGGCWQGTQGGRSYSACIDDHTKGCKCPHGFRGDGVHSCEDVDECKEKLACQCPECSCKNTWGSYECSCSNGLFYMRESDMCIGKYSASVSNGGFVWMLILILGIGGTGGYAFYKYRIQRYMDYEIRAIMAQYMPLDNQPENLNQVQHAV 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03254 628 CDD EGF_CA 519 550 - -
Vivi7g03254 628 Gene3D Laminin 413 458 - -
Vivi7g03254 628 Pfam PA domain 63 166 IPR003137 -
Vivi7g03254 628 ProSitePatterns Calcium-binding EGF-like domain signature. 519 545 IPR018097 GO:0005509
Vivi7g03254 628 SUPERFAMILY PA domain 95 184 IPR046450 -
Vivi7g03254 628 FunFam vacuolar-sorting receptor 1 412 468 - -
Vivi7g03254 628 SMART egfca_6 519 561 IPR001881 GO:0005509
Vivi7g03254 628 Gene3D - 23 189 - -
Vivi7g03254 628 Gene3D Glutaredoxin 224 403 - -
Vivi7g03254 628 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 2 619 - -
Vivi7g03254 628 Gene3D Laminin 474 561 - -
Vivi7g03254 628 FunFam Vacuolar-sorting receptor 1 23 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03254 Vivi-Chr7 97960310 97969672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03254 10 620 Miscellaneous Gene Families AT3G52850 71.778 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03254 - - gmx:100815266 1132.47