Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02733 ATGGAGGAGGACATGGGTGAGATCGACGACGTTCCTCAGGTTTACATGGCCTGCATACAAAATGGTCATAGAATAGGAGTTTCTTATTATGATTCCAGTCTTCGACAACTTAATGTGCTTGAAGCTTGGGATGACGGGGACAAAGGTTTTTCAGTTATTGATCTCGTGAAATATCAAGCAAACCCTCTGGTGATATACACAAGCACTAAATGTGATGAATCTTTCTTGGCTACTCTGCAACAAAGTGATGAAGTAGCTGAGGCTCCTACAGTAAAGCTTGTCAAAAGTTCAATATTCAGCTATGAGCAAGCATGGCACAGATTAATTTACCTTCGGGTGGCGGGAATGGATGATGGATTAGACGTCAAAGAAAGGATTTACTTTTTGAGCTCCATGATGGACATGGGAAGCGAAGTACAAGTTCGTGCTAGTGGTGGCCTTCTTGCAATATTAGAGAATGAAAGGATTGTGGATACTCTTGAGCAAAAAGAATCTGGAAACACATCAATCACAATAGATTCTTTAGCAGAAATTTCACTAAATAACTTTATCAAACTTGATGCAGCAGCTCATGAAGCATTACAAATATTCCAGATTGACAAGCACCCAAGCCACATGGGAATTGGTAGAGCAAAAGAAGGGTTTTCTGTATTTGGAATGATGAATAAGTGTGTCACTTCAATGGGTAGACGTCTTTTGAGACAGTGGTTCTTGAGGCCCATTCTTGATATTGAAGTTCTAAACTACCGATTAAATTCTATATCTTTCTTTCGATGGTCAGAAGAACTCGTTACTTCTTTACGTGAAACCCTGAAATCTGTGAAGGACATTCCGCACTTGCTGAAGAAATTTGACTCTCCAAGCTCCATATGCACTAGCACTGATTGGGCAGCACTTCTGAAGAGTATCAGTGCACTATTGCATGTAAACAAGATATTTGAAGTTGGAATTTCCGAAGGTCTTCAAGAAGAATTGAAGTACTTGAATTTGGATATTGTTGAGAAGGCAAGTTCATGCATAACAACGGAGCTTGCTTATGTGTATGAGCTGATAATTGGGGTTATTGATGTAAATAGAACTAAAGAGAAGGGATATACGACAGTGGTGAAAGAAGGCTTCTGTGATGAGTTGGACGAGCTAAGGCAAATATATGAGGAACTGCCAGAATTCCTAGAAGAGGTTTCATCATTGGAGCTTGCACAGCTCCCCGATCTATGCAAAGACAAGTTTGTTCCCTGTATTGCTTATATAGCGCAAATAGGATATTTAATGTGCATCTTTGAAGAAAAACTGGAAGAAGCCACTCTGGAGAAACTTATAGAATGGGAATACATTTTTTGTGATGAAGATGAAGAGACAAAAAAATACTTTTATCGCACACCAAAGACACAAGAGTTGGACAATCTTCTGGGAGATATCTATCATAAAATTCAAGATATGGAGCGGGCGATAACCCGAGACTTGTTTTCACATGTAATATCATTCTCAACCCATTTGATAAAGGTTTCAACCTTCGCTGCTGAACTGGACTGCTTTTTGTCAATGGCCTTGGTTGCTCGACAGAACAATTACGTCAGACCTTTATTGACTGAAGAAAACTTGCTCGATATAAAAAATGGAAGGCACGTTTTACAGGAAATGACTGTAGACACGTTTATTCCTAACGATACTAAGATTTTTCATGATGGAAGAGTTAATATCATTACTGGTCCTAACTTTTCTGGGAAGAGTATCTATATAAAACAGGTGGCTGTGATTGTTTTCCTATCCCACATTGGTAGTTTTGTGCCAGCTGATGCAGCAACTGTTGGGCTGACAGATAGAATATTTTGTGCGATGGGAAGCAGGCTTATGACAGCAGAGCAATCTACATTTATGATTGATCTACATCAAATTGGGATGATGCTGAGGCATGCTACTTCACGATCTCTGTGTCTGGTGGATGAATTCGGTAAAGGTACTCTTACAGAAGACGGCACTGGTCTACTTGCTGGGGCCATAAACCACTTTATCACATGTGATGAGCCTCCAAAGGTTTTCATATGCACTCATCTGATGGATTTATTGCATGGGTGTTCTTTAACCAAGTCGGAGCAAATTAAGTTCTACACGATGAGTATACTGAGGCCCGAAGTAAATTTAACTCAAATGGAAGACATCATTTTTTTATATAGGCTTGTCCCCGGGCATGTGCATCATAGCTATGGGCTTCACTGTGCACTGCTTGCAGGTGTGCCAGACGAAATTATTAAAAGAGCAGCAGTTGTATTGGATGCTGTTTCAAAAAACAATTGTGTTGAGAGGTTATGCAATGAGAACATCTCAGCCCAAGATGATGAGTATAAGGATGCCAGGGATAAATTGTTGAATTTCGACATTGACAGAGGCGACTTAAACCTATTTTTTGAGGAGATATTCTCCAGTTCCTAA 2430 0.3984 MEEDMGEIDDVPQVYMACIQNGHRIGVSYYDSSLRQLNVLEAWDDGDKGFSVIDLVKYQANPLVIYTSTKCDESFLATLQQSDEVAEAPTVKLVKSSIFSYEQAWHRLIYLRVAGMDDGLDVKERIYFLSSMMDMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAEISLNNFIKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTSMGRRLLRQWFLRPILDIEVLNYRLNSISFFRWSEELVTSLRETLKSVKDIPHLLKKFDSPSSICTSTDWAALLKSISALLHVNKIFEVGISEGLQEELKYLNLDIVEKASSCITTELAYVYELIIGVIDVNRTKEKGYTTVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPDLCKDKFVPCIAYIAQIGYLMCIFEEKLEEATLEKLIEWEYIFCDEDEETKKYFYRTPKTQELDNLLGDIYHKIQDMERAITRDLFSHVISFSTHLIKVSTFAAELDCFLSMALVARQNNYVRPLLTEENLLDIKNGRHVLQEMTVDTFIPNDTKIFHDGRVNIITGPNFSGKSIYIKQVAVIVFLSHIGSFVPADAATVGLTDRIFCAMGSRLMTAEQSTFMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDGTGLLAGAINHFITCDEPPKVFICTHLMDLLHGCSLTKSEQIKFYTMSILRPEVNLTQMEDIIFLYRLVPGHVHHSYGLHCALLAGVPDEIIKRAAVVLDAVSKNNCVERLCNENISAQDDEYKDARDKLLNFDIDRGDLNLFFEEIFSSS 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02733 809 ProSitePatterns DNA mismatch repair proteins mutS family signature. 643 659 IPR000432 GO:0005524|GO:0006298|GO:0030983
Vivi7g02733 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 524 760 IPR027417 -
Vivi7g02733 809 FunFam DNA mismatch repair protein MSH5 525 791 - -
Vivi7g02733 809 FunFam DNA mismatch repair protein MSH5 184 410 - -
Vivi7g02733 809 Pfam MutS domain V 567 758 IPR000432 GO:0005524|GO:0006298|GO:0030983
Vivi7g02733 809 SUPERFAMILY DNA repair protein MutS, domain III 187 523 IPR036187 -
Vivi7g02733 809 Gene3D - 185 416 - -
Vivi7g02733 809 Gene3D - 417 524 - -
Vivi7g02733 809 CDD ABC_MSH5_euk 536 745 - -
Vivi7g02733 809 Pfam MutS family domain IV 372 473 IPR007861 GO:0005524|GO:0006298|GO:0030983
Vivi7g02733 809 Pfam MutS domain III 191 516 IPR007696 GO:0005524|GO:0006298|GO:0030983
Vivi7g02733 809 PIRSF MSH2 1 792 IPR011184 GO:0005524|GO:0006298|GO:0030983
Vivi7g02733 809 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 76 773 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Vivi7g02733 809 SMART DNAend 212 548 IPR007696 GO:0005524|GO:0006298|GO:0030983
Vivi7g02733 809 Gene3D - 525 795 IPR027417 -
Vivi7g02733 809 SMART mutATP5 563 758 IPR000432 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02733 Vivi-Chr7 91346468 91359755 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02733 K08741 - gmx:100797567 1407.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02733 7 91346468 91359755 Vivi7g02733 7 91346468 91359755 ECH