Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02688 ATGGCGAACGAGAACGAACCCGCGAAACTCCTGTTACCGTACCTTCAACGCGCCGATGAATTGCAGAAACACGAACCTCTCGTCGCTTATTACTGTCGATTATATGCGATGGAGCGTGGATTGAAGATTCCGCAAAGTGATCGCACCAAAACCACTAATTCTCTTCTTGTTTCACTCATGAAACAGCTCGAAAAGGATAAAAAGTCAATCCAGCTGGGGCCTGAAGATAATTTATATCTTGAGGGATTTGCTTTGAATGTGTTTGGAAAAGCAGATAAGCAAGATCGTGCTGGAAGAGCAGATATAAGCACGGCAAAAACATTTTACGCTGCTAGCATCTTTTTTGAGATTCTTAATCAATTTGGACCAGTTCAGCCCGATCTGGAGCAGAAGCAGAAGTATGCAGCATGGAAAGCAGCTGATATAAGAAAGGCTTTGAAAGAAGGAAGGAAGCCCGTGGCTGGTCCACCTGCTGGCGACGAGGACCTGTCTGTTCCATCGAGTTCTCCTAGTATTAGATATGATCCTGGGGCTACCGAAACATCTGCTTTCAGTGCTGGATCAGAATCTGATTCAACACGTAGTTATCATAACTCGGGCAACTTCCAGAATATGCCGAGCCTTCATCCTGCACCTAAATTCAATAATACTGTTAATGATCAGAATTCTACAAACATTCCACCATCTTTGCAGTTTCATGATAGGGTAGATGATAATAAACATTCTTCAACTGTTTCTCCACCATCTCACTCTTATACACCTGGAGTTTATCCTTCTCAAGACTTCCATCCACCTCCATCTTCCCAGGATTATCATCATCCACCTCCATCTTCCCAAGATTATCATCATCCACCTCCATCCCAGGATTATCATCATCCACCTCCTTCCCAAGATTACCATCCTCCACCACCTTCCCAAGATTACCGTCCTCCTCCACCTTCTCAGGAGTACCATCCTCCTCCACCTTCCCAAGATTATCAACCTCCACCTTCCCAAGATTATCAACCTCCTCCACCTTCCCAAGATTACCATCATCCTCCACCTGCTAGATCTGACAGTTCTTATTCTGAGCCCTACAACCACCAGCAATACTCTCAAGATCAGTCGCAGAATTTAGGTCCTAATTACCCTTCTCATGAAACTCCCTCGGCATACACTCTTCCCCATTTTCAATCTTATCCAAGTTTTTCGGAAAGCACCCTACCATCGGTACCAGTAAACCAGACTTATTATCAAGGGCCTGATGCTTCATATTCTTCCCAGTCAGCTCCTCTAGCTACAAACCATTCATTAAATTCACAAAATAGTCTCGGCAGCAGAAATGGATCTGTCTTGGAGCCAAAGTCAACAACTCAGACATACCAGTATGACTGTAATTACCAGCCAGCACCTGAAAGAATAGCAGAGGCACACAAAGCTGCAAGATTTGCTGTTGGGGCACTGGCATTCGATGACGTCTCAATTGCAGTAGACTACTTGAAGAAATCACTTGAGTTGCTGACAAATCCATCAGTTGGCCAGAAAGATTTTAGTTAA 1536 0.4427 MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSDRTKTTNSLLVSLMKQLEKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADISTAKTFYAASIFFEILNQFGPVQPDLEQKQKYAAWKAADIRKALKEGRKPVAGPPAGDEDLSVPSSSPSIRYDPGATETSAFSAGSESDSTRSYHNSGNFQNMPSLHPAPKFNNTVNDQNSTNIPPSLQFHDRVDDNKHSSTVSPPSHSYTPGVYPSQDFHPPPSSQDYHHPPPSSQDYHHPPPSQDYHHPPPSQDYHPPPPSQDYRPPPPSQEYHPPPPSQDYQPPPSQDYQPPPPSQDYHHPPPARSDSSYSEPYNHQQYSQDQSQNLGPNYPSHETPSAYTLPHFQSYPSFSESTLPSVPVNQTYYQGPDASYSSQSAPLATNHSLNSQNSLGSRNGSVLEPKSTTQTYQYDCNYQPAPERIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSVGQKDFS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02688 511 Gene3D - 4 152 IPR023175 -
Vivi7g02688 511 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 331 503 IPR044538 GO:0032511
Vivi7g02688 511 MobiDBLite consensus disorder prediction 353 390 - -
Vivi7g02688 511 Pfam Vta1 like 13 148 IPR039431 -
Vivi7g02688 511 Gene3D Immunoglobulin FC, subunit C 463 502 - -
Vivi7g02688 511 MobiDBLite consensus disorder prediction 268 345 - -
Vivi7g02688 511 Pfam Vta1 C-terminal domain 464 501 IPR041212 -
Vivi7g02688 511 MobiDBLite consensus disorder prediction 242 266 - -
Vivi7g02688 511 MobiDBLite consensus disorder prediction 148 390 - -
Vivi7g02688 511 MobiDBLite consensus disorder prediction 412 448 - -
Vivi7g02688 511 MobiDBLite consensus disorder prediction 164 230 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02688 1 118 Glycosyltransferase AT1G05570 26.154 1.16e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02688 K12199 - gmx:100783739 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02688 7 90826858 90830420 Vivi7g02688 7 90826858 90830420 ECH