Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02582 ATGGCGCCTGTGGCAGCGAGAAGCGCCGGCGCTGTTGGTGCCGGAACCGCCATCTTACTCACTCTCGCCGTCGCGTATTTCTTCTGCGATCGTCGCTGCAATTCCTCAAAACACAACAAGAAGAAAAAATCAAAGAATGGAATCCTTGCCGCCATTGGTAACACTCCTTTGATTCGAATCAATAGTCTCTCCGATGCCACTGGTTGCGAAATTCTTGGCAAGTGTGAGTTTTTGAACCCTGGTGGGAGTGTCAAAGATCGTGTTGCAGTTCAAATTATTGAAGAGGCTTTAGAATCTGGGAAGCTACGTAAAGGTGGTATAGTTACTGAAGGGAGTGTCGGAAGCACTGCCATTAGCTTTGCTACTGTTGCTCCTGCTTATGGATGCAAATGCCATGTGGTTATTCCAGATGATGCTGCCATTGAGAAGTCTCAAATAATCGAAGCTCTTGGGGCCAAAGTTGAAAGAGTACGGCCAGTGTCAATCACTCACAAAGACCATTTTGTGAATATTGCAAGAAGACGGGCATCTGAAGCAAATGAGTTTGCATTTAAGAATAGAAAATCACAACCGAATGGCACGGACTCACAGCAAATAAATGGTTATAAATCTGACGAACACAACCACAACTCACTCTTTCCTGATGACTGTCAAGGCGGCTTCTTTGCTGATCAGTTTGAGAATCTTGCAAACTTCAGGGCCCATTACCAAAGTACAGGACCTGAGATTTGGGAACAAACAAATGGAAAGTTAGATGCATTCGTTGCAGGAGCAGGCACTGGTGGTACTGTGGCCGGTGTTTCCAAGTTTCTTCAGGAAAATAATCCAAACATCAAGTGTTACCTCATAGACCCTCCTGGTTCTGGCTTGTATAATAAGGTAACGAGGGGGGTAATGTACACCAAAGAGGAGGCAGAAGGACGGAGACTTAAGAATCCGTTTGACACTATAACAGAAGGAATTGGAATTAACAGGCTAACAAGGAATTTCGCAGAAGCAAAACTTGATGGGGCCTTTAGAGCCACAGATAGGGAGGCTGTTGAAATGGCCAGGTATCTTGTGAAGAATGATGGGCTTTTTCTTGGGAGTTCTTCTGCATTGAACTGTATTGGAGCAGTTAGAGCAGCACAATCATTAGGCCCTGGTCACACAATTGTAACCATTCTGTGTGACAGTGGAATGAGACATTTGAGCAAGTTTTGTAATGATGAATACTTGTCTAAGCTTGGTTTGACACCTAAAGCAACTGGATTAGAGTTCTTGGGTATCAAATGA 1275 0.4439 MAPVAARSAGAVGAGTAILLTLAVAYFFCDRRCNSSKHNKKKKSKNGILAAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGKLRKGGIVTEGSVGSTAISFATVAPAYGCKCHVVIPDDAAIEKSQIIEALGAKVERVRPVSITHKDHFVNIARRRASEANEFAFKNRKSQPNGTDSQQINGYKSDEHNHNSLFPDDCQGGFFADQFENLANFRAHYQSTGPEIWEQTNGKLDAFVAGAGTGGTVAGVSKFLQENNPNIKCYLIDPPGSGLYNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRLTRNFAEAKLDGAFRATDREAVEMARYLVKNDGLFLGSSSALNCIGAVRAAQSLGPGHTIVTILCDSGMRHLSKFCNDEYLSKLGLTPKATGLEFLGIK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02582 424 FunFam Cysteine synthase 233 397 - -
Vivi7g02582 424 Gene3D - 82 186 IPR036052 -
Vivi7g02582 424 Gene3D - 218 232 IPR036052 -
Vivi7g02582 424 CDD CBS_like 53 398 - -
Vivi7g02582 424 Gene3D - 52 81 IPR036052 -
Vivi7g02582 424 Gene3D - 233 397 IPR036052 -
Vivi7g02582 424 Pfam Pyridoxal-phosphate dependent enzyme 50 391 IPR001926 -
Vivi7g02582 424 PANTHER CYSTATHIONINE BETA-SYNTHASE 47 406 - -
Vivi7g02582 424 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 42 405 IPR036052 -
Vivi7g02582 424 FunFam Cysteine synthase, putative 52 81 - -
Vivi7g02582 424 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 74 92 IPR001216 GO:0006535
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02582 Vivi-Chr7 89653669 89657092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02582 52 398 Miscellaneous Gene Families AT3G04940 29.226 9.39e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02582 K01738 - gmx:100799081 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02582 7 89653669 89657092 Vivi7g02582 7 89653669 89657092 ECH