Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02550 ATGGCAGGGGTCGATGGAGATACATTTCCTGTTCATACTAAGGATCATGATGAATCCAAACTTTCAATCAAAGATGATGATGAGGCAGAAGAAGTGGATGATTCACCTATAGAACAGGTGAGACTAACGGTGCCAATAACAGACGACCCTTCACTCCCAGCACTTACATTTAGGACATGGGTTATTGGTATGGCAAGTTGCATTATCCTTTCCTTTGTAAACCAGTTCTTTTCGTACAGAACCACCCCTATAAGTGTCTCTTCTGTGTCAGCACAAATTGTTTCTCTACCAATTGGGAAACTAATGGCTGCAACACTTCCTACCACAGTATATAAACTTCCCATCCTCAATTGGTCTTTCACATTGAATCCTGGACCATTCAATTTGAAGGAACATGCCCTCATTACCATCCTTGCTACTTGTGGATATAGTGGTCCCTATGCCCTTAACATTGTCGCCATTGTTAAGGCTTTTTACCACAGGAGTATCAATCCAATTGCTGCTTTTTTGCTATCACTTACAACTCAGATGCTTGGTTATGGATGGGCTGGTATTTTCAGAAAGTTCCTTGTGGACTCTCCCTACATGTGGTGGCCTGCAAATCTTGTCCAGGTGTCTCTTTTCAGGGCATTTCACGAAAAAGAACATAGGCCTAAAGGAGGAAACACAAGGCTGCAATTCTTTTTCCTGGTCTTCATAGCTAGCTTTACTTATTACACTATTCCAGGCTACTTTTTCCAATCAATATCAACCATCTCTATTGTTTGTTTGATATGGAAAAAATCTGTCACTGCTCAGCAAATTGGTTCAGGAATGAAGGGTCTTGGTATTGGTTCATTTACCCTTGATTGGAATACTGTTGCTGGTTTCTTAGATAGTCCTTTGCCTGTTCCTGGTTTTGCCATCATCAACCTGCTTGCTGGATTTTTCATATTTATCTATATGGTGGTTCCCATTACCTATTGGAACAATTTTTATGAAGCCAAAAAATTTCCCTTGATCACTTCTCAAACATTTGATTCCACTGGTGCAATATATAACGTTAGCAGGATTCTTAATGAAACCACCTTTGACATTGATTTGGATAATTATAACAGTTACAGCAAACTCTATCTTAGTGTCATATTTGCATTTGACTACGGATTGAGCTTTGCAATTCTCACTGCCACCATTTCTCACGTTTTCCTCTTCCATGGAAAAGAGATTCTTGTGATGTGGAGGAAGACAACAGCCGCACTAAAAGAACAAACCGGAGACGTGCATACAAGAATCATGAAGAAAAACTACGCACAAGTCCCTGAGTGGTGGTTCATGACAATCTTAGTCCTTATGATTATTTTGGCCTTGTTCTGTTGCGAAGGCTTTGGCAAGCAACTCCAACTTCCATGGTGGGGAGTCTTACTTTCCCTAGTTATTGCATTAGTTTTCACTTTGCCAGTTGGTGTCATTCAAGCAACAACAAACATGCAACCTGGGCTAAATGTGATCACAGAGTTGATCATTGGGTACCTTTATCCCGGAAAGCCTCTTGCTAATGTTACCTTCAAGACTTACGGATACATTAGCATGGCGCAGGCACTTACTTTTATTCGTGACTTCAAATTAGGCCACTACATGAAAATTGCTCCGAGATCTATGTTCATAGTACAGTTGGCAGGAACCGTGGTTGGTACAACTGCAAACTTCGCCACAGCATGGTGGCTTCTAACAAGTATTCCAAACATATGTAACCCGGCATTGTTGCCAGAAGGTAGTCCTTGGACTTGTCCCGGTGATGAAGTGTTTTACAATGCTTCAATCATATGGGGAGTAATAGGACCGCAGAGAATGTTCACCAAGGACGGAATTTACCCTGGAATGAACTGGTTTTTCCTCATCGGTCTACTTGCGCCTGTTCCGGTTTGGCTCCTAGCTCGCAAATACCCGAACCACAAGTGGATTGAACTCATCCACCTGCCACTAATCTTTGCAGGTGGCTCGAGTATACCACCAGTTAGAGCAGTGAATTATCTTTCATGGGGAGCTGTTGGAATTTTCTTCAACTTCTATATTTACAAAAAGTACAAGACATGGTGGGCTAGACACACTTACATTCTGTCAGCAGCTTTGGATGCTGGTATTGCTTTCATGGGTGTGTTACTCTATTTTGCGCTTCAAAATTACGATATCTTCGGTCCAGATTGGTGGGGTCTTGACGGAAGTGATCACTGCCCCTTGGCTACGTGTCCTACAGCTCCTGGTGTAATAACCAAGGGGTGTCCTACCTTTTAA 2271 0.4205 MAGVDGDTFPVHTKDHDESKLSIKDDDEAEEVDDSPIEQVRLTVPITDDPSLPALTFRTWVIGMASCIILSFVNQFFSYRTTPISVSSVSAQIVSLPIGKLMAATLPTTVYKLPILNWSFTLNPGPFNLKEHALITILATCGYSGPYALNIVAIVKAFYHRSINPIAAFLLSLTTQMLGYGWAGIFRKFLVDSPYMWWPANLVQVSLFRAFHEKEHRPKGGNTRLQFFFLVFIASFTYYTIPGYFFQSISTISIVCLIWKKSVTAQQIGSGMKGLGIGSFTLDWNTVAGFLDSPLPVPGFAIINLLAGFFIFIYMVVPITYWNNFYEAKKFPLITSQTFDSTGAIYNVSRILNETTFDIDLDNYNSYSKLYLSVIFAFDYGLSFAILTATISHVFLFHGKEILVMWRKTTAALKEQTGDVHTRIMKKNYAQVPEWWFMTILVLMIILALFCCEGFGKQLQLPWWGVLLSLVIALVFTLPVGVIQATTNMQPGLNVITELIIGYLYPGKPLANVTFKTYGYISMAQALTFIRDFKLGHYMKIAPRSMFIVQLAGTVVGTTANFATAWWLLTSIPNICNPALLPEGSPWTCPGDEVFYNASIIWGVIGPQRMFTKDGIYPGMNWFFLIGLLAPVPVWLLARKYPNHKWIELIHLPLIFAGGSSIPPVRAVNYLSWGAVGIFFNFYIYKKYKTWWARHTYILSAALDAGIAFMGVLLYFALQNYDIFGPDWWGLDGSDHCPLATCPTAPGVITKGCPTF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02550 756 NCBIfam OPT family oligopeptide transporter 39 719 IPR004813 GO:0035673
Vivi7g02550 756 NCBIfam small oligopeptide transporter, OPT family 33 721 IPR004648 GO:0055085
Vivi7g02550 756 MobiDBLite consensus disorder prediction 9 26 - -
Vivi7g02550 756 Pfam OPT oligopeptide transporter protein 55 717 IPR004813 GO:0035673
Vivi7g02550 756 PANTHER ISP4 LIKE PROTEIN 26 754 IPR004648 GO:0055085
Vivi7g02550 756 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02550 Vivi-Chr7 89430499 89434042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02550 18 756 Organic Solute Cotransporters AT4G26590 68.200 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02550 - - gmx:100776230 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02550 7 89430499 89434042 Vivi7g02550 7 89430499 89434042 ECH