Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02548 ATGGGAAGCACCGATTTGAAGTACGAGGTTTCACAAAACGCTTACATCAAACTTGTTCTCCACTCCCTCAAACACCCCACATCTGCCGTCAACGGCGTCTTGATCGGCCGCATCTCCCCTTCCAACGCCACCGTCGAGATCACCGATGCCGTTCCTCTCTTCCATTCTCAAATCCCTCTTCTTCCTCAATTAGAGATCTCTCTAATTCTGATAGATGAATATTTTTCTGCTAAAGGGTTAAACATAGTTGGTTACTTTCATGCCAATGAGAGGTCTGATGAATTTGAACTTGGCGGTGTGGCGAAGAATATTGGTGATCATATCTCTCGTTACTTTCCACAAGCTGCTATTCTATTGTTAGATAACAAGAAGCTTGAGGCTTTGAAAAAGAGCAAGAGTAGTGGTGCTGTAATGCAGGGACGCATCTAA 429 0.4429 MGSTDLKYEVSQNAYIKLVLHSLKHPTSAVNGVLIGRISPSNATVEITDAVPLFHSQIPLLPQLEISLILIDEYFSAKGLNIVGYFHANERSDEFELGGVAKNIGDHISRYFPQAAILLLDNKKLEALKKSKSSGAVMQGRI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02548 142 Pfam Uncharacterised protein family (UPF0172) 7 131 IPR005366 GO:0072546
Vivi7g02548 142 ProSiteProfiles MPN domain profile. 8 142 IPR037518 -
Vivi7g02548 142 PANTHER ER MEMBRANE PROTEIN COMPLEX 6 132 IPR005366 GO:0072546
Vivi7g02548 142 CDD MPN_UPF0172 10 126 IPR005366 GO:0072546
Vivi7g02548 142 Gene3D Cytidine Deaminase, domain 2 7 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02548 Vivi-Chr7 89417790 89419374 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02548 K23569 - gmx:100527135 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02548 7 89417790 89419374 Vivi7g02548 7 89417790 89419374 ECH