Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02480 ATGCACAGACTCTCCAATCGCTCTTCCTCCGTCTCCGCCCTACTCCGTTACGGCGGCGCACTTCGCCGTGACGCCGCTCTCCCACTTTCCGCTTCTCACTCTCATTTGGTGGGAGAGAATGACACAAAATCCCGATGGTATTCATTATTAAGTTCTGAGAAATCTGGCAGTGTTGATCAGCTAAACTCAAAAAAAGATTTGTTTTTGGGAAAACGATATGAATCAACTGTTGCAGAATCTAGTGCATCAAGTACTCCACCAGCTGAGAAATTTGAGTACCAAGCAGAGGTTAGTCGGCTCATGGACCTTATTGTTAACAGTTTATACAGTAACAAGGAAGTGTTTCTCAGGGAACTTATCAGTAATGCAAGTGATGCCTTGGATAAGCTGCGGTTTTTGAGTGTCACAGAGCCTGACTTGATGAAGGATGCAATTGATTTTGATATCCGAATTCAAGCTGATAAAGATAATGGGATCATCACTATTACTGATACAGGCATTGGTATGACGAAGCAGGAACTAGTTGACTGTCTTGGAACTATTGCTCAAAGTGGAACTGCTAAGTTTTTGAAGGCTCTCAAGGATAGTAAGGGTGCTGGCGGTGACAACAACTTAATTGGTCAATTTGGTGTGGGATTTTATTCTGCTTTTCTAGTTGCTGATCGGGTGGTTGTCTCAACCAAGAGTCCAAGATCAGATAAACAATACGTTTGGGAAGGAGAGGTAAATGCTAGCTCATATACCATATCTGAGGAGACGGATCAGGAAAAGCTGATTCCAAGAGGAACTCGCCTTACCCTGCATCTTAAGAGGGATGACAAAGGTTTTGCTCATCCAGAGCGAATTGAGAAGCTTGTGAAAAACTACTCCCAATTTGTCTCATTCCCAATATACACTTGGCAGGAAAAGGGATTCACCAAAGAAATAGAGGTTGATGAGGATCCAGCTGAGGCGAAAACAGACACCCAAGATGAGAAGACTGAGAAGAAGAAGAAAACTAAGACTGTTGTTGAGAAGTATTGGGACTGGGAGCTCACAAATGAGACACAGCCTATCTGGCTTCGTAATCCTAAAGAAGTCACCAAAGAGGACTACAACGAATTTTATAAGAAAACATTTAATGAATACCTGGAGCCATTGGCATCATCACACTTTACCACAGAGGGTGAGGTAGAATTTAGGTCTATACTTTATGTTCCTCCTTATGCTCCATCAGGGAAGGATGATGTAATCAATCCCAAGACCAAGAATATAAGACTTTATGTGAAGAGAGTGTTTATTTCAGACGACTTTGATGGAGAACTGTTCCCACGATACTTGAGTTTTGTCAAAGGTGTGGTCGACTCAAATGACCTTCCACTCAATGTGTCACGTGAAATTCTTCAAGAGAGCCGCATAGTGCGGATTATGAGGAAGCGGTTGGTCAGAAAGGCTTTTGATATGATTTTGGGGATATCCATGAGTGATAACAAAGAGGACTATGAGAAGTTTTGGGATAACTTTGGCAAACACTTGAAATTGGGTTGCATTGAAGACCGAGAGAATCACAAACGCATTGCTCCGTTGCTTCGTTTTTTCTCATCCCAAAGTGAGGAAGAGTTTATCAGCTTGGATGAATATGTTGAGAACATGAAACCTGATCAAAAGGATATTTATTACATTGCTGCTGACAGTGTGAATAGTGCAAAGAACACACCTTTCTTGGAAAAACTTGCAGAGAAGGATCTTGAAGTGCTGTTTTTGGTGGATCCAATAGACGAGGTTGCCATCCAAAATATTAAATCATACAAGGAAAAGAATTTTGTTGATATTAGCAAGGAAGACTTGGATCTAGGTGACAAAAATGAGGAAAAGGAAAAGGAGATGAAGCAGGAATATAGCGGGACAATTGATTGGATCAAGAAACGCTTGGGTGATAAAGTTGCAAGTGTGCAGATCTCAAACCGATTGAGCTCTTCGCCTTGTGTCCTGGTGTCGGGAAAATTTGGTTGGTCTGCAAACATGGAAAGGCTAATGAAGTCACAAACTATGGGTGATGCCACTAGCTTGGAATTCATGAGAAGCAGAAGGGTGTTTGAGATCAACCCTGAACATCCTATTATCAAGAACTTGGATGCTGCTTGTAAAACTAATCCCGATGATCAAGAGGCCCTCAGAGCTATTGATCTTCTGTACGATGCAGCTTTGGTTTCCAGTGGGTTTACGCCTGATAATCCAGCACAGCTAGGAGGAAAGATATACGAGATGATGGGTATGGCTCTCAATGGTAGATGGTCATCTCCTCCAAGTCAGTTTGAGTCTACTCAAACTCAACCCCATGTTCTAGAAACTGTAGAAGCTGAAGTGGTCGAGCCAACCGAAGCTGGCAGTCAAAAGTGA 2379 0.4233 MHRLSNRSSSVSALLRYGGALRRDAALPLSASHSHLVGENDTKSRWYSLLSSEKSGSVDQLNSKKDLFLGKRYESTVAESSASSTPPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPDLMKDAIDFDIRIQADKDNGIITITDTGIGMTKQELVDCLGTIAQSGTAKFLKALKDSKGAGGDNNLIGQFGVGFYSAFLVADRVVVSTKSPRSDKQYVWEGEVNASSYTISEETDQEKLIPRGTRLTLHLKRDDKGFAHPERIEKLVKNYSQFVSFPIYTWQEKGFTKEIEVDEDPAEAKTDTQDEKTEKKKKTKTVVEKYWDWELTNETQPIWLRNPKEVTKEDYNEFYKKTFNEYLEPLASSHFTTEGEVEFRSILYVPPYAPSGKDDVINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSDNKEDYEKFWDNFGKHLKLGCIEDRENHKRIAPLLRFFSSQSEEEFISLDEYVENMKPDQKDIYYIAADSVNSAKNTPFLEKLAEKDLEVLFLVDPIDEVAIQNIKSYKEKNFVDISKEDLDLGDKNEEKEKEMKQEYSGTIDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKSQTMGDATSLEFMRSRRVFEINPEHPIIKNLDAACKTNPDDQEALRAIDLLYDAALVSSGFTPDNPAQLGGKIYEMMGMALNGRWSSPPSQFESTQTQPHVLETVEAEVVEPTEAGSQK 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02480 792 FunFam heat shock protein 90-5, chloroplastic 76 318 - -
Vivi7g02480 792 FunFam heat shock protein 90-5, chloroplastic 347 519 - -
Vivi7g02480 792 SUPERFAMILY HSP90 C-terminal domain 630 750 IPR037196 -
Vivi7g02480 792 SUPERFAMILY Ribosomal protein S5 domain 2-like 349 607 IPR020568 -
Vivi7g02480 792 FunFam Heat shock protein 90 alpha 607 755 - -
Vivi7g02480 792 CDD HATPase_Hsp90-like 98 293 IPR020575 -
Vivi7g02480 792 Pfam Hsp90 protein 276 760 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vivi7g02480 792 Gene3D - 347 519 - -
Vivi7g02480 792 Hamap Chaperone protein HtpG [htpG]. 86 751 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vivi7g02480 792 FunFam Heat shock protein 90 520 606 - -
Vivi7g02480 792 Gene3D - 75 318 IPR036890 -
Vivi7g02480 792 Gene3D - 607 754 IPR037196 -
Vivi7g02480 792 PRINTS 90kDa heat shock protein signature 89 109 IPR020575 -
Vivi7g02480 792 PRINTS 90kDa heat shock protein signature 177 194 IPR020575 -
Vivi7g02480 792 PRINTS 90kDa heat shock protein signature 110 132 IPR020575 -
Vivi7g02480 792 PRINTS 90kDa heat shock protein signature 261 278 IPR020575 -
Vivi7g02480 792 PRINTS 90kDa heat shock protein signature 279 297 IPR020575 -
Vivi7g02480 792 PRINTS 90kDa heat shock protein signature 159 176 IPR020575 -
Vivi7g02480 792 PRINTS 90kDa heat shock protein signature 206 228 IPR020575 -
Vivi7g02480 792 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 81 766 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vivi7g02480 792 PIRSF HSP90_HTPG 54 790 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vivi7g02480 792 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 89 303 IPR036890 -
Vivi7g02480 792 Gene3D - 520 606 - -
Vivi7g02480 792 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 111 271 IPR003594 -
Vivi7g02480 792 ProSitePatterns Heat shock hsp90 proteins family signature. 109 118 IPR019805 GO:0005524|GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02480 Vivi-Chr7 88723019 88729285 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02480 K09487 - gmx:100806710 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02480 7 88723019 88729285 Vivi7g02480 7 88723019 88729285 ECH