Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02176 ATGGCGGCGAACGCTCCGATCGCCATGAAGGAAGTCCTAACCTTGCCGAGTGTTGGCATCAATGCACAACACATCACTTTCACGCATGTGACTATGGAATCGGAGAAGTATATATGTGTTAGAGAAACAACTCCACAGAATAGCGTGGTTATCGTTGATATGAGCATGCCAAATCAACCTTTGAGGAGGCCGATTACTGCTGATTCCGCTCTTATGAATCCTAATTCTAGAATCCTTGCTTTGAAAGCTCTACTCCAAGGGACTACACAGGATCACCTACAAATATTTAATATTGAATTGAAAACGAAGATAAAATCTCATCAGATGCCCGAGCAGGTAGTCTTCTGGAAGTGGATTAGCCCCAAAATGTTGGGCCTCGTGACACAAACCTCTGTATACCACTGGTCAGTTGAAGGTGATTCTGAACCTGTTAAGATATTTGAGAGAACAGCAAATTTGGCAAACAACCAGATAATCAATTATCGATGTGACCCAACAGAAAAATGGTTGGTCTTGATTGGTATTGCTCCTGGTAACCCCGAGAGGCCACAATTGGTTAAAGGGAACATGCAGCTTTTCTCTGTGGATCAGCAGCGCAGTCAGGCTCTTGAAGCTCATGCTGCATCATTTGCCCAATTCAAAGTTCCCGGGAATGAAAATCCTTCTGTTTTGATTTCTTTTGCCTCAAAGACACTTAATGCTGGTCAAGTTGTATCCAAGTTACACGTCATTGAACTGGGCGCTCAGCCAGGGAAGCCATCATTTACAAAGAAACAAGCAGATCTTTTCTTCCCCCCAGATTTTGCTGATGATTTTCCAGTTTCAATGCAGATATCCCACAAATATAGTTTGATTTATGTGATTACCAAACTTGGCCTACTTTTTGTATACGACTTGGAGACAGCTACTGCTGTATATAGGAACAGAATTAGTCCAGATCCTATATTTTTGACTTCAGAAGCCACATCAGCTGGTGGATTTTATGCCATTAATAGGAGAGGCCAAGTTTTGTTGGCCACTGTTAATGAACAAACAATTGTGAATTTTGTCAGCGGTCAATTAAACAATTTAGAGCTAGCTGTTAGTCTTGCCAAAAGAGGAAATCTTCCTGGTGCTGAAAAGCTGGTGGTGGAGCGTTTTCATGAATTATTTTCCCAAACGAAGTATAAAGAAGCAGCAGAGCTTGCTGCTGAATCTCCACAAGGGATCCTTCGTACTCCTGACACAGTTGCCAAATTCCAGAGTGTTCCCGTGCAAACTGGTCAAACTCCGCCGCTGCTGCAGTATTTTGGAACACTTTTAACGAGGGGAAAGCTGAATGCCTTTGAATCATTAGAATTGTCTCGGTTGGTTGTGAACCAGAACAAGAAAAATCTGTTGGAAAACTGGTTGGCAGAGGACAAGCTTGAATGCAGCGAGGAGCTAGGAGATCTTGTTAAGACTGTGGACAACGATCTTGCTTTAAAAATATACATCAAAGCTAGAGCTACTCCGAAGGTTGTTGCTGCTTTTGCTGAGAGGAGGGAGTTTGACAAGATTCTGGTCTACTCTAAGCAGGTTGGGTACACACCAGACTACCTCTTCCTCTTGCAAACAATTCTCCGAACTGATCCTCAGGGTGCTGTTAATTTTGCATTAATGATGTCTCAAATGGAGGGAGGTAGCCCAATTGATTACAACACCATAACTGATCTGTTTCTTCAGAGAAACCTGATCCGCGAGGCAACAGCTTTTCTCCTGGATGTTTTAAAACCTAATTTACCAGAACATGGATTCCTTCAGACAAAGGTTTTGGAGATAAATCTGGTCACTTTCCCTAATGTTGCTGATGCTATTTTGGCTAATGGCATGTTCAGCCATTATGACTGTCCTCGTATTGCCCAGCTATGTGAAAAAGCTGGCCTTTACGTGCGAGCGTTGCAACATTACACAGAGTTACCAGATATAAAACGTGTGATTGTTAATACACATGCAATTGAGCCTCAGTCACTTGTAGAATTTTTCGGTACTCTTTCACGGGAATGGGCATTAGAGTGCATGAAAGACTTATTACTAGCCAATCTAAGGGGCAATTTACAGATTATTGTGCAGGTTGCTAAAGAATATTCTGAACAATTGGGCGTTGATGGCTGCATTAAGATTTTTGAGCAGTTTAGATCATATGAAGGGCTGTATTTTTTTCTTGGATCCTACTTGAGTTCTAGTGAGGACCCCGACATTCATTTCAAGTATATTGAGGCAGCAGCAAAGACTGGTCAAATCAAGGAGGTCGAGCGTGTGACAAGAGAATCCAATTTCTATGATGCCGAAAAAACTAAGAACTTCCTAATGGAGGCTAAGCTTCCAGATGCCCGACCTTTAATCAATGTCTGCGATCGATTTGGGTTTGTTCCAGATCTTACACACTACTTATACACAAACAACATGCTTCGCTACATTGAGGGTTATGTTCAGAAGGTGAACCCAGGGAATGCTCCTTTAGTTGTTGGGCAGCTACTAGATGATGAGTGCCCAGAAGATTTTATCAAAGGTTTGATTCTTTCTGTTCGGTCCTTGCTGCCAGTGGAGCCCCTTGTGGAGGAGTGTGAGAAGAGGAATCGACTTCGTTTGCTCTCACAGTTTTTGGAACATCTTGTGAGTGAGGGAAGCCAAGATGTCCATGTTCACAATGCACTGGGTAAAATTATCATTGATAGCAATAATAACCCAGAACATTTTCTCACAACCAACCCATACTATGATTCTCGAGTTGTGGGCAAATATTGTGAGAAACGTGACCCGACCTTGGCAGTTGTAGCTTACCGACGAGGACAATGTGATGAAGAACTTATCAATGTCACTAGTAAAAATTCCTTGTTCAAACTTCAAGCAAGATATGTTGTTGAGAGAATGGATGGCGATCTGTGGGCTCAAGTTCTTGATCCTGAAAATGAATATAGAAGGCAACTTATTGATCAGGTTGTATCTACTGCTCTGCCTGAAAGCTCAAGCCCCGAACAGGTTTCTGCAGCTGTTAAGGCTTTCATGACAGCTGATCTGCCTCATGAATTGATTGAACTTCTTGAGAAGATTGTGCTTCAGAATTCTGCATTCAGTGGGAACTTCAATTTACAGAATCTTCTCATTTTGACAGCGATAAAAGCTGATTCATCCAGAGTTATGGATTATATCAATAGACTGGATAATTTTGACGGGCCTGCAGTTGGAGAAATGGCTGTAGAAGCACAGTTGTATGAGGAAGCATTTGCAATTTTCAAGAAGTTCAACTTGAATGTTCAAGCAGTCAATGTGTTGCTTGATAATATTCGTAGTGTTGATAGAGCTGTTGAGTTTGCTTTCAGAGTTGAAGAAGACGCTGTTTGGAGTCAGGTTGCAAAGGCTCAACTCAGGGAGGGGCTTGTTAGCGATGCAATTGAGTCATTTATACGTGCAGATGATACTACACAATTTTTGGATGTTATCCGTGCTGCTGAAGATGCCAATGTTTACCATGACTTGGTCAAATACTTGTTAATGGTAAGACAGAAGGCAAAAGAACCAAAGGTTGACGGCGAGCTCATTTATGCATATGCAAAGATTGATAGGCTTAGTGACATTGAAGAGTTCATTCTGATGCCAAATGTTGCTAATTTGCAAAATGTTGGAGACCGATTGTATGATGAAGCATTATATGAGGCAGCAAAAATCATTTATGCCTTTATATCTAACTGGGCCAAGTTGGCTGTTACACTGGTCAAGTTACAACAATTCCAAGGCGCTGTTGATGCAGCAAGGAAAGCTAATAGCTCAAAGACATGGAAGGAAGTTTGTTTTGCTTGTGTTGATGCAGAGGAGTTTCGCTTGGCCCAGATATGTGGACTCAACATTATTGTTCAGGTGGATGACTTGGAAGAGGTCAGTGAATATTACCAAAATAGAGGTTACTTCAATGAGTTAATATCTCTGATGGAGAGTGGTTTAGGGTTGGAACGAGCTCATATGGGCATCTTCACCGAGTTGGGAGTTCTTTATGCTAGATACCGCCCTGAGAAGCTTATGGAGCATATCAAACTATTCTCAACCCGCCTCAATATCCCAAAACTCATTAGAGCATGTGATGAACAACAGCATTGGAAAGAATTGACCTTTTTGTATATCCAATATGATGAGTTTGATAATGCCGCAACTACCATCATGAACCATTCACCTGAAGCATGGGATCACATGCAATTCAAAGATGTTGCTGTCAAAGTTGCTAATGTTGAATTGTATTACAAGGCTGTTCACTTCTATTTGGAAGAACATCCAGATCTCCTCAATGATATTCTGAATGTCCTTGCACTTCGTGTGGACCACGCCCGTGTTGTTGACATAATGCGTAAGGCTGGTCACCTGCGTCTTGTGAAGCCATACATGGTTGCAGTTCAGAGCAACAATGTGTCTGCTGTTAATGAAGCCCTGAACGAGATATATGTCGAGGAGGAAGATTATGATAGATTGCGTGAATCAATTGATTTGCATGATAACTTTGATCAAATAGGTCTTGCACAAAAGATTGAGAAGCATGAGCTTGTTGAGATGAGACGGGTTGCTGCTTATATTTACAAGAAGGCGGGAAGATGGAAGCAGTCCATTGCTTTGTCAAAGAAGGATAACCTTTACAAAGATGCCATGGAGACAGCTTCACAATCTGGCGAGCGTGAACTGGCTGAGGAGTTGCTTGTTTATTTCATTGATCAGGGAAAGAAGGAATGCTTTGCCTCATGTCTATTTGTTTGCTATGATTTAATACGAGCAGACATTGTTCTTGAACTAGCTTGGATGCACAATATGATCGACTTTGCCTTCCCATACCTCTTGCAGTTTATCCGTGAGTACACAGGTAAAGTTGATGAACTAGTGAAAGACAGAATTGAAGCACAAAATGAAGTGAAGTCTAAGGAGAAAGAAGAAAAGGATGTAGTTGCACAACAGAACATGTATGCTCAACTGTTGCCTCTTGCTTTGCCTGCACCACCAATGCCTGGAATGGGAGGACCAGGTTTTGCAGGAAACTATGCACCTCCCCCTCCAGTGGGTGGAATGGGAATGCCCCAAATGCCTCCTTTTGGGATGCCACCCATGGGTTACTAA 5112 0.4204 MAANAPIAMKEVLTLPSVGINAQHITFTHVTMESEKYICVRETTPQNSVVIVDMSMPNQPLRRPITADSALMNPNSRILALKALLQGTTQDHLQIFNIELKTKIKSHQMPEQVVFWKWISPKMLGLVTQTSVYHWSVEGDSEPVKIFERTANLANNQIINYRCDPTEKWLVLIGIAPGNPERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSVLISFASKTLNAGQVVSKLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVSMQISHKYSLIYVITKLGLLFVYDLETATAVYRNRISPDPIFLTSEATSAGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLELAVSLAKRGNLPGAEKLVVERFHELFSQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQTGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILVYSKQVGYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGSPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLEINLVTFPNVADAILANGMFSHYDCPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLLANLRGNLQIIVQVAKEYSEQLGVDGCIKIFEQFRSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLSQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTSKNSLFKLQARYVVERMDGDLWAQVLDPENEYRRQLIDQVVSTALPESSSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADSSRVMDYINRLDNFDGPAVGEMAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIRSVDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDTTQFLDVIRAAEDANVYHDLVKYLLMVRQKAKEPKVDGELIYAYAKIDRLSDIEEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLQQFQGAVDAARKANSSKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGYFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTFLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLEEHPDLLNDILNVLALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGERELAEELLVYFIDQGKKECFASCLFVCYDLIRADIVLELAWMHNMIDFAFPYLLQFIREYTGKVDELVKDRIEAQNEVKSKEKEEKDVVAQQNMYAQLLPLALPAPPMPGMGGPGFAGNYAPPPPVGGMGMPQMPPFGMPPMGY 1703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02176 1703 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 699 841 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Gene3D Tetratricopeptide repeat domain 1055 1195 IPR011990 GO:0005515
Vivi7g02176 1703 Gene3D Tetratricopeptide repeat domain 901 1054 IPR011990 GO:0005515
Vivi7g02176 1703 Gene3D Tetratricopeptide repeat domain 1196 1535 IPR011990 GO:0005515
Vivi7g02176 1703 SUPERFAMILY ARM repeat 1050 1194 IPR016024 -
Vivi7g02176 1703 FunFam Clathrin heavy chain 1 376 - -
Vivi7g02176 1703 SUPERFAMILY ARM repeat 344 499 IPR016024 -
Vivi7g02176 1703 SUPERFAMILY Clathrin heavy-chain terminal domain 4 342 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Vivi7g02176 1703 Pfam Clathrin-H-link 368 433 - -
Vivi7g02176 1703 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 550 696 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 SUPERFAMILY ARM repeat 900 1065 IPR016024 -
Vivi7g02176 1703 PANTHER CLATHRIN HEAVY CHAIN RELATED 1 1497 - -
Vivi7g02176 1703 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1436 1579 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 FunFam Clathrin heavy chain 1196 1535 - -
Vivi7g02176 1703 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 992 1137 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Gene3D - 1541 1637 - -
Vivi7g02176 1703 SUPERFAMILY ARM repeat 456 792 IPR016024 -
Vivi7g02176 1703 FunFam Clathrin heavy chain 1053 1195 - -
Vivi7g02176 1703 FunFam Clathrin heavy chain 458 786 - -
Vivi7g02176 1703 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 846 985 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Gene3D - 1 376 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Vivi7g02176 1703 Coils Coil 1616 1643 - -
Vivi7g02176 1703 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1141 1282 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 FunFam Clathrin heavy chain 901 1052 - -
Vivi7g02176 1703 Coils Coil 1476 1496 - -
Vivi7g02176 1703 PIRSF CHC 2 1688 IPR016341 GO:0016192|GO:0032051|GO:0071439
Vivi7g02176 1703 Pfam Region in Clathrin and VPS 1145 1280 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Pfam Region in Clathrin and VPS 700 839 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Pfam Region in Clathrin and VPS 992 1130 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Pfam Region in Clathrin and VPS 1288 1431 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Pfam Region in Clathrin and VPS 849 982 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Pfam Region in Clathrin and VPS 554 689 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Pfam Region in Clathrin and VPS 1439 1578 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 Pfam Clathrin, heavy-chain linker 343 366 IPR015348 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Vivi7g02176 1703 SUPERFAMILY ARM repeat 1195 1530 IPR016024 -
Vivi7g02176 1703 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1287 1433 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 FunFam Clathrin heavy chain 1541 1637 - -
Vivi7g02176 1703 Pfam Clathrin propeller repeat 153 196 IPR022365 -
Vivi7g02176 1703 Pfam Clathrin propeller repeat 19 54 IPR022365 -
Vivi7g02176 1703 SMART CLH_2 846 985 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 SMART CLH_2 992 1137 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 SMART CLH_2 1141 1282 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 SMART CLH_2 550 692 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 SMART CLH_2 1436 1595 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 SMART CLH_2 1287 1433 IPR000547 GO:0006886|GO:0016192
Vivi7g02176 1703 SMART CLH_2 699 841 IPR000547 GO:0006886|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02176 Vivi-Chr7 84370351 84383967 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02176 K04646 - gmx:100786617 3152.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04324 3 77627628 77639911 Vivi7g02176 7 84370351 84383967 ECH
Vivi7g02176 7 84370351 84383967 Vivi7g02176 7 84370351 84383967 ECH
Vivi3g04324 3 77627628 77639911 Vivi7g02176 7 84370351 84383967 PCT