Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01290 ATGTCTTCTGTTACTTACTCTACCCATCCTGATGCTAAGTCTGACTTGCAAAGAAATCTTGCTGATTTTCACCCTAACGTTTGGGGAGAATATTTCCTTCAATATGCTTCTGAATCTATTGAAATTGATCAGAATATTGGAGCACAGATTGAAACATTAAAAGATGAAGTGAGGAAGATGCTTCTCTCAAAAACTGAAAATCAATTGCTAAAAGTCAATTTGATTGATTCAATATGTCGTTTGGGTGTGAGCTATCATTTTGAACATGAGATTGACGAAGTTTTGCAACATATTCATAAGACTTGTGTTGAAAATGAAGAAATAATTCTTGAAGACAATCTCTACTTTATTGCTGTGCTATTTAGGGTCTTGAGGCAACAAGGATTTCATGTTTCCTCAAATGTGTTCACCAAATTCAAGGACGAGCAAGGAAACTTTAGTAAAAAACTTGTCACCGATGTTGAAGGGATGTTAAGCTTGTATGAAGCGTCACATATGATGATTCACGAAGAGGACATTTTAGAAGAAGCAATGACTTTCACTTCCACCAACTTAGAATCCATTGCCACCCAATTAAACCCTTCTCTTGCAGCACAAGTCAAATATACTTTAAAGCAGGCTCTTCACAAGAACTTGCCTAGGCTAGAGGCACGACGCTACATTTCTATCTATGAACAAAATCCTTTACATAGTGAAATTTTACTCACTTTGGCAAAACTAGATTTTAATATGCTTCAAACCTTACATCAAAAAGAATTTGGTAACATTTGCAAGTGGTGGATTGGAATGGATGTTCCTAGAAAATTCTCTTTTGCACGAGATAGGATTGTGGAATGCTGCTTTTGGATTTTATCAGTATATTATGAACCCCAATTTTCTCAAGCAAGGAAAATAATGACAAAATTAATTGCCATGTTATCGATAATCGACGATACTTTTGATGCATACGGAACTATTGATGAACTAGAACTTTTTGCCAAGACAATTGAGAGGTGGGATATCAAGAACTTGGATGATCTTCCAGAATATATGAAATTAATTTATAGAACGGTCTTGAAGAATTTGGAAGAAATAGAACAAAATATGACTAAAGAAGGGAGACTCTTTACCCTTAAATACTACATAAAAGAATTCCAAATAATAGTCGATGCATTTATGACTGAAGCAAGATGGTTCAACAATAATTATGTACCAACAACAGAAGAGTATTTGAACATTTCAAAAATATCAAGCGCTCAATCATTATTGATAACATGTTCTTACATTGGCATGGGAGACATAGCCACAGAAAACATTTTCAAATGGGTATCAGATAAACCAAAAATGGTGAATGCGGTTGCTACTCTTTGTAGGCTAATGGATGAAATTGTATCTAGTGAGTTTGAACATAAAAGAGGACACGTTTGTTCATTGTTGGATTGCATTATGAAGCAAAATGAGATGTCTAGGGAAGCTGCTATTGAAGAATGTAGAGAGAGAATTGCAAATACTTGGAAAGATATAAATGAGGAGTGTCTTAATCCAACTGAAGTTCCAATGCCTTTTTTAACTCGTGCTATCAACCTTTCACGTTTTATGGATGTTGTTTACAAAGATAAAGATAACTACACACATTCAGAAGGATCGATGAAGTCATACATCAAACTTGTGCTTGTGGATCCAATTCCAATTTGA 1674 0.3471 MSSVTYSTHPDAKSDLQRNLADFHPNVWGEYFLQYASESIEIDQNIGAQIETLKDEVRKMLLSKTENQLLKVNLIDSICRLGVSYHFEHEIDEVLQHIHKTCVENEEIILEDNLYFIAVLFRVLRQQGFHVSSNVFTKFKDEQGNFSKKLVTDVEGMLSLYEASHMMIHEEDILEEAMTFTSTNLESIATQLNPSLAAQVKYTLKQALHKNLPRLEARRYISIYEQNPLHSEILLTLAKLDFNMLQTLHQKEFGNICKWWIGMDVPRKFSFARDRIVECCFWILSVYYEPQFSQARKIMTKLIAMLSIIDDTFDAYGTIDELELFAKTIERWDIKNLDDLPEYMKLIYRTVLKNLEEIEQNMTKEGRLFTLKYYIKEFQIIVDAFMTEARWFNNNYVPTTEEYLNISKISSAQSLLITCSYIGMGDIATENIFKWVSDKPKMVNAVATLCRLMDEIVSSEFEHKRGHVCSLLDCIMKQNEMSREAAIEECRERIANTWKDINEECLNPTEVPMPFLTRAINLSRFMDVVYKDKDNYTHSEGSMKSYIKLVLVDPIPI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01290 557 SFLD Terpene Cyclase Like 1 C Terminal Domain 232 556 IPR034741 -
Vivi7g01290 557 SFLD Isoprenoid Synthase Type I 232 556 - -
Vivi7g01290 557 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 24 228 IPR008930 -
Vivi7g01290 557 Pfam Terpene synthase family, metal binding domain 235 500 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vivi7g01290 557 SUPERFAMILY Terpenoid synthases 230 555 IPR008949 -
Vivi7g01290 557 CDD Terpene_cyclase_plant_C1 18 554 IPR044814 GO:0010333|GO:0016102
Vivi7g01290 557 Pfam Terpene synthase, N-terminal domain 28 204 IPR001906 GO:0010333|GO:0016829
Vivi7g01290 557 Gene3D - 66 230 IPR036965 GO:0010333|GO:0016829
Vivi7g01290 557 Gene3D Farnesyl Diphosphate Synthase 25 545 IPR008949 -
Vivi7g01290 557 PANTHER OS04G0344100 PROTEIN-RELATED 18 555 - -
Vivi7g01290 557 FunFam Isoprene synthase, chloroplastic 191 545 - -
Vivi7g01290 557 FunFam Isoprene synthase, chloroplastic 66 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01290 Vivi-Chr7 66488834 66491494 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01290 K15803 - aprc:113865171 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01290 7 66488834 66491494 Vivi7g01290 7 66488834 66491494 ECH