Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01264 ATGTCTTCTGTTGATTACTCCACTAATCCTGATGCCAATTCCAACTTACAAAGAAATCTGGCTGATTTTCACCCTAACGTTTGGGGAGAATATTTCATTCAATTTGCTTCTGAGTCTATGGAACTTGATCCGAATATCGTAGCACAGATTGATGCATTAAAAGGTGAAGTGGGAAAGATGATTCTCTCAAAAACTAAAAAGCCAATAGAAAAAGTCAAGTTAATTGATTCAATATGTCGTTTGGGTGTGAGCTATCATTTTGAACATGAGATTGATAAAGTTATGCATCATATTTTCAAGAGTTGTGCTGAAAATGGAGAAATAATTCTTGAAGACGATGTTTGCTCTATTGCTGTGCTCTTTAGGGTTTTGAGGCAACATGGATTTCATGTTTCACCAAATGTGTTCACCAAACTCAAGGATGAGCAAGGATATTTCAATAAAAAACTTATCTCCGATGTTGAAGGGATGTTAAGCTTGTATGAAGCATCACATATGATGATTCATGGAGAGGATATTTTAGAAGAAGTGTTGGCTTTCACTTCCACCAACCTTGAATCCGTTGCTACCCAATCAAGCCATCCTCTTGCAGCGCGAATTAAATATACTTTAAAGCAGGCTATTCATAAGAACTTTCCTAGGCTAGAGGCACGACGTTACATTTCTATCTATGAGGAAGATCCTTTCCATGATGAAATTTTACTCACTTTGGCAAAACGAGATTTTAATTTGCTCCAAACCCTACATCAAAAAGAATTTGGAAACCTCTGCAAGTGGTGGAAGGAGTTGGATATCCCTACCAACTTACAATTTGCACGAGATAGAATTGTGGAAATGTGCTTTTGGGTGTTGGCTATGTATTTTGAGCCACAATATTCTCAAGCAAGGAAAATGACTACAAAATTAGGTGCCATATTATCAATAGTTGATGATACATATGATGCGTACGGAACGATTGATGAATTAGAACTTTTTTCCAAAGCAATTAAAAGGTGGGATATTAGCAACTTTGACCATCTTCCAGATTATATGAAATTAATTTATATAACAGTTTTGAAGGCTTTGGAAGAAATAGAACAAGAAGTGACTAAAGAAGGAAGACTCTATACCCTTAAATATTACATAAAAGAATTCCAAATGGTAGTCCATGCATATATGACTGAAGCTAGATGGCTCAATAGTAACTATGTACCAACAATAGAAGAGTACTTGAACATTTCAAAAATAACATGTTGTCAGTCATTATTGATAACAAGTTCTTACATTGGCATGGGTAACACAGCCACAGAGGACAAATTCATTTGGGTTTCAAAGAAGCCTAAAATGGTTGATGCCGTTGCTACTGTTTGTAGGCTAATGGATGAACTCGTAACCAACGAGTTTGAACATGAAAGAGAACATGTTTGCTCGTTGTTGGATTGCATTATGAAGCAAAAAGATGTGTCTAAAGAAGCTGCTACCGAAGAATGTAAAAAGAGACTTGCAAATGCTTGGAAAGATATAAATGAGGAATGTCTAATGCCAACTGATGTTCCAATGCCTTTTATGACTCGTGCTATCAATCTTTCACGTTTTATGGATGTTGTTTACAAAGATAAAGATAACTACACACATTCAGAAGGTTTAATGAAGTCATACATCAAAAGTGTGCTAGTGGATCAAGTTCCAATTTAA 1674 0.3572 MSSVDYSTNPDANSNLQRNLADFHPNVWGEYFIQFASESMELDPNIVAQIDALKGEVGKMILSKTKKPIEKVKLIDSICRLGVSYHFEHEIDKVMHHIFKSCAENGEIILEDDVCSIAVLFRVLRQHGFHVSPNVFTKLKDEQGYFNKKLISDVEGMLSLYEASHMMIHGEDILEEVLAFTSTNLESVATQSSHPLAARIKYTLKQAIHKNFPRLEARRYISIYEEDPFHDEILLTLAKRDFNLLQTLHQKEFGNLCKWWKELDIPTNLQFARDRIVEMCFWVLAMYFEPQYSQARKMTTKLGAILSIVDDTYDAYGTIDELELFSKAIKRWDISNFDHLPDYMKLIYITVLKALEEIEQEVTKEGRLYTLKYYIKEFQMVVHAYMTEARWLNSNYVPTIEEYLNISKITCCQSLLITSSYIGMGNTATEDKFIWVSKKPKMVDAVATVCRLMDELVTNEFEHEREHVCSLLDCIMKQKDVSKEAATEECKKRLANAWKDINEECLMPTDVPMPFMTRAINLSRFMDVVYKDKDNYTHSEGLMKSYIKSVLVDQVPI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01264 557 FunFam Isoprene synthase, chloroplastic 66 230 - -
Vivi7g01264 557 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 24 228 IPR008930 -
Vivi7g01264 557 SUPERFAMILY Terpenoid synthases 230 554 IPR008949 -
Vivi7g01264 557 Pfam Terpene synthase, N-terminal domain 28 204 IPR001906 GO:0010333|GO:0016829
Vivi7g01264 557 SFLD Isoprenoid Synthase Type I 232 555 - -
Vivi7g01264 557 PANTHER OS04G0344100 PROTEIN-RELATED 17 542 - -
Vivi7g01264 557 SFLD Terpene Cyclase Like 1 C Terminal Domain 232 555 IPR034741 -
Vivi7g01264 557 CDD Terpene_cyclase_plant_C1 18 554 IPR044814 GO:0010333|GO:0016102
Vivi7g01264 557 Pfam Terpene synthase family, metal binding domain 235 500 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vivi7g01264 557 Gene3D - 66 230 IPR036965 GO:0010333|GO:0016829
Vivi7g01264 557 FunFam Isoprene synthase, chloroplastic 203 545 - -
Vivi7g01264 557 Gene3D Farnesyl Diphosphate Synthase 25 545 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01264 Vivi-Chr7 65112993 65116301 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01264 K15803 - aprc:113865171 766.918