Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01262 ATGAGAGAAAACCATCCTCCAACTCCAACAACAACACCAGATCTACCAACAAGAGGCGAGATCGCCGAATCCTCCACCTCAAAAAACCGAACCGGTTCATCCCAACCATTCCCCGGTTCACCCCTCACCGAAAACCCATCCCCCTTCCCCGACCAAGTCCTCGAGAACGTCCTCGAAAACGTCCTCCACTTCCTCTCCTCCCGCCAAGACCGCAACGCCGCCTCATTGGTCTGCCGTTCATGGTACCGCGCCGAAGCCCTCACTCGATCCGACCTCTTCATCGGAAACTGTTACGCCCTCTCCCCCCGCCGCGCCACCGCCCGCTTCAGCCGCATCAAGTCGGTTACCGTCAAGGGGAAGCCGAGGTTCGCGGATTTCGATCTGATGCCGGTTGATTGGGGGGCCCACTTCACTCCTTGGGTTACTTCGCTTGCTCAGGCTTATCCATGGCTTGAAAAGCTTCACCTGAAACGGATGTCTGTTACCGATAAAGATCTCGGTATCATCGCTGATTCGTTCGCCGGTTTTCGTGAACTTTTGCTAGTTTGCTGTGAAGGATTTGGTACCCCTGGTCTTGCTGTTATTGCTTCTAAGTGCAGATTGCTGAGGGTGCTGGAACTGGTGGAATCTGTGATTGAGGTTGAGGATGATGCTGAGGTGGATTGGGTATCTTGTTTTCCGAGTGAGGGACAGACTCATTTGGAGTCTCTTGCTTTTGATTGTGTTGAGTGTCCGGTGAATTTTGAGGCATTGGAAGGGCTGGTGGCTAGATCGCCTGGTTTGAAGAAGCTTAGATTGAACAGATCTGTTTCGATGGTTCAGCTTCATCGGCTCATGCTTCGTGCTCCGCAGCTCACACATCTTGGAACGGGTTCGTTCAGTGCTAATGAGAATGTTGATCAAGAGCCTGATTATGCATCTGCTTTTGCAGCTTGCAGATCGTTGGTTTGTTTGTCTGGATTTAGGGAGATTTGGCCGGATTATCTTCCTGCTATTTATCCGGTTTGCTCGAACCTTACTTCGTTGAATTTTAGTTATGCTGATGTTAATGAGGAACAGCTGAAGTCTGTTATATGCCATTGTCATAAGCTGCAGATATTGTGGGTCCTTGATTCAATAGGCGACGAAGGCCTTCAGGCAGTGGCTGCAACTTGCAATGACTTGCGCGAGCTTCGTGTTTTTCCTGTGGATGCGAGGGAAGAAACTGTAGGTCCTGTTTCTCAGGTTGGTTTTGAAGCCATCTCGCAGGGTTGTAGAAAATTAGAATCAATTTTGTTTTTCTGCCAGACGATGACGAACGCAGCTGTGATTGCAATGTCGAGGAACTGTCCAAATCTTGTGGTGTTTCGTCTTTGTATAATTGGGGTGTATCGTCCCGATGCTGTGACACAAGAACCCATGGATGAGGGTTTTGGTGCTATCGTTATGAACTGCAAGAAGCTCACCCGACTCGCTGTATCTGGTTTGCTAACTGATCGAGCTTTTGAATACATCGGAAGGTATGGGAAATTGGTCAGGACACTATCAGTTGCCTTTGCCGGAGACACTGACACTGGCCTTAAGTATGTACTCGAAGGGTGCCCTAATTTGCAGAAACTTGAAATCAGGGACAGTCCATTTGGGGACGGAGCTTTGCGATCCGGTTTGCATCATTATTATAACATGAGGTTCCTTTGGATGTCGTCCTGTAAATTGACACGTCAAGCTTGCCAAGAAGTTGCACGAACACTACCTCAAATGGTTTTGGAAGTTATCAACAATGGCGAAGATGCAGTTGAGGAGGATATTGGAATACTGTACATGTATCGGTCTCTTGATGGGCCGCGAGATGATGCTCCAGAAAATGTTACAATTCTGCACTAG 1863 0.4868 MRENHPPTPTTTPDLPTRGEIAESSTSKNRTGSSQPFPGSPLTENPSPFPDQVLENVLENVLHFLSSRQDRNAASLVCRSWYRAEALTRSDLFIGNCYALSPRRATARFSRIKSVTVKGKPRFADFDLMPVDWGAHFTPWVTSLAQAYPWLEKLHLKRMSVTDKDLGIIADSFAGFRELLLVCCEGFGTPGLAVIASKCRLLRVLELVESVIEVEDDAEVDWVSCFPSEGQTHLESLAFDCVECPVNFEALEGLVARSPGLKKLRLNRSVSMVQLHRLMLRAPQLTHLGTGSFSANENVDQEPDYASAFAACRSLVCLSGFREIWPDYLPAIYPVCSNLTSLNFSYADVNEEQLKSVICHCHKLQILWVLDSIGDEGLQAVAATCNDLRELRVFPVDAREETVGPVSQVGFEAISQGCRKLESILFFCQTMTNAAVIAMSRNCPNLVVFRLCIIGVYRPDAVTQEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFEYIGRYGKLVRTLSVAFAGDTDTGLKYVLEGCPNLQKLEIRDSPFGDGALRSGLHHYYNMRFLWMSSCKLTRQACQEVARTLPQMVLEVINNGEDAVEEDIGILYMYRSLDGPRDDAPENVTILH 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01262 620 FunFam Transport inhibitor response 1 90 619 - -
Vivi7g01262 620 SUPERFAMILY F-box domain 49 84 IPR036047 GO:0005515
Vivi7g01262 620 Pfam F-box 51 90 IPR041567 -
Vivi7g01262 620 SUPERFAMILY RNI-like 75 581 - -
Vivi7g01262 620 CDD F-box_AtTIR1-like 51 89 - -
Vivi7g01262 620 Gene3D Ribonuclease Inhibitor 91 619 IPR032675 -
Vivi7g01262 620 MobiDBLite consensus disorder prediction 1 50 - -
Vivi7g01262 620 Pfam Transport inhibitor response 1 protein domain 111 156 IPR041101 -
Vivi7g01262 620 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 130 581 - -
Vivi7g01262 620 FunFam Transport inhibitor response 1-like protein 44 89 - -
Vivi7g01262 620 Gene3D - 47 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01262 Vivi-Chr7 64964442 64967778 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01262 - - gmx:100807836 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01262 7 64964442 64967778 Vivi7g01262 7 64964442 64967778 ECH