Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01141 ATGGATAGCATAATGAGCAAGCTTCGGAATCTCGATGCGTATCCTAAAATCAACGAAGATTTCTATTCTCGCACGCTTTCCGGCGGTGTTATCACTCTCGCTTCCTCCATTGTCATGTTCTTGCTTTTCTTCTCCGAGCTTCGGTTGTATCTTCATGCCGCAACTGAAACTAAGCTTGTTGTAGATACTTCTAGAGGAGAAACGCTGCGTATTAATTTTGATGTTACATTTCCCGCACTAGCGTGTTCTGTAGTTAGTATCGATGCCATGGACATAAGTGGAGAGCAGCATCTGGATGTTAGACATGATATAATCAAGAAAAGAATAGATTCTCATGGCAATGTGATAGAGACAAGGCAAGATGGAATTGGTTCACCCACGATTGACAAGCCCTTGCAAAGACATGGAGGCAGGCTTGAGCACAATGAGACTTATTGTGGATCCTGTTATGGTGCTGAGACGTCTGATGAGGAATGTTGTAATTCCTGCGAGGAAGTTCGTGAAGCATATCGAAAGAAAGGTTGGGGACTCTCAAACCCTGATGAAATTGACCAGTGCAAAAGAGAAGGATTCTTAGAAAGAATCAAGGAAGAAGATGGTGAAGGATGCAATATGTATGGCTTCTTGGAAGTAAACAAGGTGGCAGGGAATTTCCATTTTGCTCCTGGGAAAAGCTTTCAGCAATCTGGCGTACATGTACATGACATACTGGCTTTTCAAAAGGAGTCATTTAATTTAACTCACCACATCAACAGAATAGCCTTTGGAGACTATTTTCCCGGTGTTGTAAACCCTCTTGACCGTGTGCATTGGACGCAAAAAACACCAAGTGGGATGTACCAGTATTTTATTAAGGTTGTGCCAACTATGTATACTGACGTCAATGGGAACACTATCCAGTCAAACCAGTTTTCTGTGACTGAACACTTCAGGACAGGAGATGTAGGCCATCTGCAATCCCTCCCTGGAGTTTTTTTCTTCTATGACCTTTCCCCAATTAAGGTTACTTTTACTGAACAACATGTATCATTCTTACATTTTCTTACCAATGTGTGCGCCATAGTTGGAGGTGTTTACACTGTTTCTGGAATACTAGATTCATTTATCTATCATGGCCAAAAGGCTATCAAGAAGAAGATGGAACTTGGTAAATTTAACTGA 1161 0.416 MDSIMSKLRNLDAYPKINEDFYSRTLSGGVITLASSIVMFLLFFSELRLYLHAATETKLVVDTSRGETLRINFDVTFPALACSVVSIDAMDISGEQHLDVRHDIIKKRIDSHGNVIETRQDGIGSPTIDKPLQRHGGRLEHNETYCGSCYGAETSDEECCNSCEEVREAYRKKGWGLSNPDEIDQCKREGFLERIKEEDGEGCNMYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDILAFQKESFNLTHHINRIAFGDYFPGVVNPLDRVHWTQKTPSGMYQYFIKVVPTMYTDVNGNTIQSNQFSVTEHFRTGDVGHLQSLPGVFFFYDLSPIKVTFTEQHVSFLHFLTNVCAIVGGVYTVSGILDSFIYHGQKAIKKKMELGKFN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01141 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 385 IPR045888 -
Vivi7g01141 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Vivi7g01141 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01141 Vivi-Chr7 59098917 59110941 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01141 K20367 - gmx:100782309 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01141 7 59098917 59110941 Vivi7g01141 7 59098917 59110941 ECH