Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00476 ATGCTTCGCCGCAATGTCCCGCCCCGCACCACAATCCCGCCCCGCACCACAATCATCTCAACCATCCGCCAAAAATCAAGCGGCGGAAGACGACCAAAGAAAAAAACCTACCACCGAGTCCCCGAACTCGACAGAGTAATGGAGCTTCGCAAGAAACCCATAACAATCCTCGAACTCAAAACCCTAATCCAATCCCAACCAAAAAACAGCCCTCTCTTCCTCCGTGACCTCGAGAAAAACGTCGGCTTTGTTCGCAAATGGGACTTCATGACCCTCATCGAAAAACACCCCACCATTTTCCGCGTAACTGGGTCTCCCCCTTTCGTTCATTTCACCGATAAGGCCCATCGAGTGGCCCAAGAAGAAGCCCGGGCCCGGATTCTGATGGAGCCGGTTTTGGTTAATAATCTTAGGAAGATGCTTATGCTTTGTGTTGAGAATAGGATTCCTCTTGAAACGGTTGAGTTTGTTGGACCTGAGATGGGTTTGCCTTGTGATTTTAAGGGATGTTTGATTGATAAGTATCCTCAGTTTTTTTCTGTTAGGGCTTTCAATGGAAGGGATTATGTTTATTTGGAGGATTGGGATTCTACTTTGGCTGTTACTGCTAGAGAAACTAGGTTGGCACAAGAAGGAGTTGTTGTGAACATGAAACCAAGCGAGGATAAGAAGAAGGTGAAGATTTCAAAAGATGGGAACTATGCTGGTCCATTTGCATTCAAAGTGAACTTTCCTACTGGTTTTAGGCCAAATGTTAATTTCCTTGAACAGTTTGAACGGTGGCAGAAATTGGAGTTTCCTTCTCCTTATTTAAATGCAAGAAGGTTTGATGCCGCAGATCCGAAAACTCGAAAACGGGCCTTGGGAGTGATTCATGAGCTTCTCAGCTTGACCATGGAGAGGAGGATGACATCTGCCCAACTGGATGCATTTCATGCAGAGTGTTTCTTGCCGTCGCAATTGCTGCTTTGCTTAATAAAGCATCATGGGATATTTTACCTCACTAATAAAGGTGTAAGGAGTACGGTTTTCCTCAAGGATGCGTATGTTGGTTCTAACTTGATTGATAAGTGTCCTTTATTGCAATTTAATGATAAATTTGTGGCACTCTGTGGTAGAGGAAATGTTGATTTGTGTGACATCAAGAGTTCTTTACAAGCTGTTGTTTAG 1170 0.4436 MLRRNVPPRTTIPPRTTIISTIRQKSSGGRRPKKKTYHRVPELDRVMELRKKPITILELKTLIQSQPKNSPLFLRDLEKNVGFVRKWDFMTLIEKHPTIFRVTGSPPFVHFTDKAHRVAQEEARARILMEPVLVNNLRKMLMLCVENRIPLETVEFVGPEMGLPCDFKGCLIDKYPQFFSVRAFNGRDYVYLEDWDSTLAVTARETRLAQEGVVVNMKPSEDKKKVKISKDGNYAGPFAFKVNFPTGFRPNVNFLEQFERWQKLEFPSPYLNARRFDAADPKTRKRALGVIHELLSLTMERRMTSAQLDAFHAECFLPSQLLLCLIKHHGIFYLTNKGVRSTVFLKDAYVGSNLIDKCPLLQFNDKFVALCGRGNVDLCDIKSSLQAVV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00476 389 Pfam Plant organelle RNA recognition domain 38 374 IPR021099 GO:0003723
Vivi7g00476 389 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 24 375 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00476 Vivi-Chr7 27524154 27527194 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00476 - - psat:127075304 720.309