Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00442 ATGTCTCTGTTTAATGCTTACCCCATTTTTGAACTTGGTAAAGATGCAGCTGGAATTGCTGGTAACATCTTTGCATTTGGGTTATTTGTTTCCCCAATACCTACATTTAGGAGAATTATCACAAATGGGTCAACGGAATTGTTCTCAGGATTGCCATATATTTATTCTCTATTGAATTGCTTGATTTGTTTGTGGTATGGAACTCCTCTTATATCAATTGATAATCTCTTGGTTACCACCGTTAATTCAATTGGAGCAGCTTTTCAGCTTGTGTATATTCTCTTATTTTTAATCTATGCTGAGAAACCAAGAAAGGTGAGAATGTTTGGATTATTGCTGGCGGTTTTCGGTATATTTGTTGTCATACTGGTTGGGAGCTTGAAAATAAGTGATAGTTCTATGCGCCGAATGTTTGTTGGATGCTTGAGTTGTGCTTCTCTGATTTCAATGTTTGCATCTCCGTTGTTTATCATTAATTTGGTCATTCGCACTAAGAGTGTTGAGTTTATGCCATTTTTTCTTTCGCTTTCGACGTTCTTAATGAGCGTTTCCTTCTTTCTTTATGGATTACTCAGTGATGATGTCTTCATTTATGTACCAAATGGGATAGGTACCGGTTTGGCAATGATACAATTGGTATTATACTTCTATTTCAAGAGATCATCTTGCGATGACTCAAGAGAACCCTTGATAGTTTCATATGGATAA 708 0.3616 MSLFNAYPIFELGKDAAGIAGNIFAFGLFVSPIPTFRRIITNGSTELFSGLPYIYSLLNCLICLWYGTPLISIDNLLVTTVNSIGAAFQLVYILLFLIYAEKPRKVRMFGLLLAVFGIFVVILVGSLKISDSSMRRMFVGCLSCASLISMFASPLFIINLVIRTKSVEFMPFFLSLSTFLMSVSFFLYGLLSDDVFIYVPNGIGTGLAMIQLVLYFYFKRSSCDDSREPLIVSYG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00442 235 Pfam Sugar efflux transporter for intercellular exchange 138 220 IPR004316 GO:0016020
Vivi7g00442 235 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016020
Vivi7g00442 235 Gene3D - 11 104 - -
Vivi7g00442 235 FunFam Bidirectional sugar transporter SWEET 135 228 - -
Vivi7g00442 235 PANTHER RAG1-ACTIVATING PROTEIN 1 23 222 IPR047664 -
Vivi7g00442 235 Gene3D - 137 228 - -
Vivi7g00442 235 FunFam Bidirectional sugar transporter SWEET 15 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00442 Vivi-Chr7 25241238 25244242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00442 14 234 Miscellaneous Gene Families AT3G14770 68.018 1.61e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00442 K15382 - gmx:100790469 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05984 2 190988474 190990892 Vivi7g00442 7 25241238 25244242 PCT