Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05851 ATGGCGGGAGGTAGTAGTAGAAAAAGTCGAAGACGGAGAAGATCCGATGATTCTGCATCGGAGTCGGACTCCGACGACCGGAGGCGAAGTAGTCGCCGGTCACGGCGGGATTCAGATGATTCCAGTGAAGAAGATGATAGAAGTGGAAGAAAGAAAAAGTCTTCGAGAACAATCACAGAAGAGGAAATTTCACAGTATATGGCTAAAAAAGCGCATAGAAAGGCTACGAAAGTTGCTAAAAAGTTAAAGACGAATACAGTATCTGGTTATTCCAATGACTCTAATCCATTTGGTGATTCTAATCTCAATGAAAAGTTTGTTTGGCGCAAGAAGATTGAACGCGATGTTACTCAAGGTGTATCTATTGAATCCTTTTCAGTTAAGGCTGAGAAGAAAAGACAAGTGGATAGGATGGCAGAAATTGAAAAGGTGAAAAAGAGGAGAGAGGAAAGGGCACTTGAGAAAGCACAACATGAAGAAGAAATGGCATTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTCCAAGACTGGGAAAAAAAGGAAGAGGAGTTCCATTTCGATCAAAGCAAAGTTAGGTCAGAAATTAGATTGCGTGAAGGGCGTGCCAGGCCAATTGATGTCCTAACCAAGCACCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACTTGGTCTTCAAGGGTTTGACTGTTAAAGAAATGAGTGAACTTCGTGATGACATCAAAATGCATCTGGATCTTGACAGGGCAACACCAACCCATGTGGAATATTGGGAGGCTCTCCTTGTGGTGTGCGATTGGGAGCTAGCTGAATCTCGGAAAAAGGATGCAATTGATCGGGCTAGGGTTCGTGGAGAAGAACCTCCTGCTGAGCTGCTTGCTGAACAAAGGGGTTTGCATTCCAGTGTTGAGCCAGATGTGAAGGACCTTTTACATGGAAAGACGCGTACAGAGTTGGAAGCCCTAGAGGTTCACATTGAGTCAGAGATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACAGCTCCACATATACAAGGCCAAGGCTTGTTTAAAGGAAATCCATGCTAAAATGTTACGTAAGCATTTGCAACGTCTTGAACAACCATTGGAGGATGAAGATGAACCGGAGACTGCTCATGACATGATACCTGAGGAGGCATATACCGAGGACGATACTAAAGTCCGTTCTGCAGATGAATCATTTTCACCAGAGCCCATTAGAGAGAATCAAGAAGCTGAAGACGAGGCTGGATCATTTTCACCACAACTATTGCATGATGATGAAAATGAAGAAGCTATTGATCCTGAAGAGGACAGAGCTATACTGGAGCGAAAACGTATAGCTGTAATAGAAGAGCAGCAAAGACGAATTCAGGAAGCAATGGCTTCAAAGCCTGCTCCATCGGAAGATAATTTAGAGATGAAAGCCATAAAAGCTATGGGAGCTATGGAGGATGGAGATGCAGTGTTTGGATCTGGAGCTGAAGTGAGCCTTGATTCCCAGGTTTATTGGTGGCATGACAAGTACAGACCAAGGAAGCCGAAGTATTTCAACCGTGTTCACACCGGATATGAATGGAACAAATATAACCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGGGTACAAATTTAATATTTTCTATCCTGACCTTGTAGACAAGATAAAAGCCCCTAACTACACTATTGACAAGGATGGCAGCAATGGAGAGACTTGCATTATACGATTCCATGCAGGGCCACCATATGAAGATATAGCTTTCCGCATTGTAAACAAAGAATGGGAATATTCTCACAAGAAAGGTTTTAAGTGCACATTTGAACGTGGAATTCTGCATGTGTACTTCAATTTCAAACGCCACCGTTACCGCAGATAG 1920 0.4323 MAGGSSRKSRRRRRSDDSASESDSDDRRRSSRRSRRDSDDSSEEDDRSGRKKKSSRTITEEEISQYMAKKAHRKATKVAKKLKTNTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGVSIESFSVKAEKKRQVDRMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYLVFKGLTVKEMSELRDDIKMHLDLDRATPTHVEYWEALLVVCDWELAESRKKDAIDRARVRGEEPPAELLAEQRGLHSSVEPDVKDLLHGKTRTELEALEVHIESEMRTGTAKVVEYWEAILKQLHIYKAKACLKEIHAKMLRKHLQRLEQPLEDEDEPETAHDMIPEEAYTEDDTKVRSADESFSPEPIRENQEAEDEAGSFSPQLLHDDENEEAIDPEEDRAILERKRIAVIEEQQRRIQEAMASKPAPSEDNLEMKAIKAMGAMEDGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPNYTIDKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05851 639 Pfam Cactus-binding C-terminus of cactin protein 515 639 IPR019134 GO:0005515
Vivi6g05851 639 SMART CactinC_cactus_3 515 639 - -
Vivi6g05851 639 Coils Coil 139 175 - -
Vivi6g05851 639 MobiDBLite consensus disorder prediction 10 69 - -
Vivi6g05851 639 MobiDBLite consensus disorder prediction 376 432 - -
Vivi6g05851 639 MobiDBLite consensus disorder prediction 1 80 - -
Vivi6g05851 639 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 39 639 - -
Vivi6g05851 639 MobiDBLite consensus disorder prediction 390 432 - -
Vivi6g05851 639 Pfam Conserved mid region of cactin 167 364 IPR018816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05851 Vivi-Chr6 166212677 166218339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05851 K25058 - gmx:100780087 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05851 6 166212677 166218339 Vivi6g05851 6 166212677 166218339 ECH