Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05819 ATGGGCGCCTCGTTGTCGAACCTTGGATCCAACGGTTCGACCATCGGTCCAAGCCTCGGCGACATCCCGGAGAATTGCGTTGCTCGTGTTTTCCTCCACCTATCTCCGCCGGAGATTTGTAACCTAGCTCGTCTCAATCGCGCTTTTCGCGGCGCCGCTTCCGCTGATTCCGTTTGGGAATCGAAATTGCCGTCGAACTATCAAGATCTTGTCCGTTTATTGCCGGTGGAACGGTGTCGGGGTCTGTCGAAGAAGGATATCTTCGCTGCTCTCTCTCGGCCGTTGCCGTTTGATGACGGTAATAAGCAATTGTGGCTTGATAGGGGTACTGGAAGGGTTTGCATGTCGATTTCGGCGAAAGGTTTGGTGATTACTGGAATTGATGATAGGAGATACTGGACTTGGGTTCCCACTGAAGAATCTAGGTTCAATGTTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGATCGACTTTCCATTTCCTGCTGATACTTATACTCTCTCCTTTAGACTTCACCTTGGACGGTTTTCCAAAAGGCTCGGTCGGCGTGTATGCAATTATGAACAGACCCATGGTTGGGATATAAAGCCTGTAATATTTGAGTTGTCAACATCAGATGGTCAACAAGCATCATCTGAGTGCTGCTTAGATGAAACTGAGAACGACGATACATACGGCAATCATAAGCGAGGATATTGGGTAGATTACAAGGTAGGCGAGTTTATTGTGAGTGGATCGAAACCTACTACTAAAGTTAGATTCTCCATGAAACAGATTGATTGTACACACTCAAAAGGCGGGCTTTGTGTAGATTCTGTATTTATCGTACCTAGCGATTTGAGAGACCGCAAGGGAGGTGGCTTTTTGAAATAA 888 0.4673 MGASLSNLGSNGSTIGPSLGDIPENCVARVFLHLSPPEICNLARLNRAFRGAASADSVWESKLPSNYQDLVRLLPVERCRGLSKKDIFAALSRPLPFDDGNKQLWLDRGTGRVCMSISAKGLVITGIDDRRYWTWVPTEESRFNVVAYLQQIWWFEVDGEIDFPFPADTYTLSFRLHLGRFSKRLGRRVCNYEQTHGWDIKPVIFELSTSDGQQASSECCLDETENDDTYGNHKRGYWVDYKVGEFIVSGSKPTTKVRFSMKQIDCTHSKGGLCVDSVFIVPSDLRDRKGGGFLK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05819 295 Pfam Phloem protein 2 113 282 IPR025886 -
Vivi6g05819 295 PANTHER F-BOX PROTEIN PP2-A15 7 288 - -
Vivi6g05819 295 SUPERFAMILY F-box domain 17 72 IPR036047 GO:0005515
Vivi6g05819 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Vivi6g05819 295 CDD F-box_AtSKIP3-like 19 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05819 Vivi-Chr6 165538101 165541467 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05819 - - gmx:100807328 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05819 6 165538101 165541467 Vivi6g05819 6 165538101 165541467 ECH