Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05798 ATGGAGTTTGGTGAGACAGAGAAAAGGAAGGTTAATTCAGAGGTTCCATGGATACCCACCACACCTTTTAAGCCCATTGCACAAAGACCAGAGCAGATCTGCAATACTGGAGAGAGAAATCAACTGAATTCTCATTTCAATGGGGAATTTGTATCTTTGGAATCCTCAGGAGGTGGAGATGTTAACAACAGGTCAGAGTTTGTGGAATCTGTGGCTGGAACATCAAACATTGGTCATGACAATGCGAGAACTCGGGTGCAGGTGTCGTTCGACGATGTTCCTGGTCCGAGTAATAGTAGTTTTGCTGAGCTTTTGGCTCAGGCAGGGGCGCCTTCAGCTTATGCTAATTCAAGATATAGTTTTTTGGAGAATCAGTTCGTTTCTGGTGTGTGGAACTCACAGTTCGAACAGAGCTATGCATTACTTGGCAATCACAATCTGTATCAGCAACAGCAACAGCTTTATAACAATTTTATTCAAGACAATTACCAAGATCCTCGAGGCACATCATACATGGGTTACTATGGCCAGACCAATTCTCAGGTTGCCCTGCCTCCAGAAAATGTCGTCACAGCAAAAGACAAGCAAGTTGTGGAGACACAGATTTGTATGGAACAAGTGGATCAAAGGGAAGATGAGGATAATGCCTCAGCCACAATGTGCAACAATTCACAAAACAAACTGTATGATCCTGCTGCTGTTGTAGACTTGACTGCTATTCCTACACCGTGCAAGGAGGATAATAACCCCAATAAGGAAATACACCATGTTATTGATCTTAATGAAATACCCCAAACAAAACCGAAAAGAAGAAAGCACCGTCCCAAGGTCATAAAAGAAGGAAAACCGAAAAAACCCAGGAAGCCACCCACTCCGAAGCCTGATCAATCAAAAGAAAACTCGACTCAAAAGAGGAAGTATGTGAGAAAGAAAGATTTAAACACAACTCCAGCAGAAGTGCCAGGGGAATGCAATGAACAATTAATAGCTGAGTCTGCCAAAAAGACGTGTAGAAGGTCCTTATACTTTGAGATACCAGAACAACCTAGAGATGGAAACTTTGCATGCAGAGAAGAAAATGCAACTATGCAGTTTGGTGGTGAAACCGGCGTAGAGGTCCAGAAAACACAAGCTCTAAATAATTACATGTCATCACGAGAAGACGCACAAGCCTCCACCAGTAACGGAAGATTTTCGAGTAACGCGTCACAAGAAGTAGGTTCCCAGAGAAAACCATCTGGTGCCATTAAGCAGGCAGACAACGGCAGCGTTAACCTAATTGGGGCGCAATATAATTTATTGCAGGCATACCAGTCAAGGTATTGGGTTCAATTTCCAAATGTTCAGAAGAAAAGGAGAAGTGAAAAGGTGAAATTTTCTAACACAGCAAATACATCTTCCATGACTGCTACAAAAGATGTTCAAATCACAACATGCTCTGAAGAGAATGCCAGATCATATCAAGATGCATCAACTTCTAATGGCTGGACTTCTGCTTCTGCTTCTGAATATGAAACAGCGAAACTCCTAACCATGCTCAGAGCTGCAGAAAGTGCTACCTGTGATAAATCGCAATCGCTCGAGTACAATTTATTTTCAGGACAGAGCAGACCAACCAAAAAAAGATCAAGAGTCACTAGCAGAGCTCATGATTACACTTCACTGGCCATAGTCAGAAACTGTGATGCCAAACTTAATAATATTGCAAACCAAAGCAGTTCTGGTAGAAAAACATTTGAGGATGCCCAAAGACCACAAACAGGCATTGATGCTCTAGTCGCGGAGATGCGTGCATCACTCACAAAAAAGAAACGGAGTAAAAAGAGAAGTGTTTCTATCAATTCCACATATTCTAGCAGAGATGAAATGCAACAGCATCTTCCCTCGCATAGCTCGTTAGGTGTTGCTCGTGGAGAAAGCTGGAAAAGCATATATACTGTGGACACATTAACACAGCAGTTTAGCCAGCTAAGCATATATAGAGAAGCTAGAGAGCTTGTACTGTATGGCCAGAACGCACTTGTCTCTTACAAGCAGAAAACTTTAAAACGCAAAGGCCGGCGGGTTCAGGAATATGGCACCATGATTCCCTACGAAGGCGTGTTTGATCCCATCAAGAAACAACGTCCACGACCTAAAGTTGATCTTGATGAAGAAACTAATAAAGTGTGGAAGCTTCTGATGTTGGATATAAACAGTCATGGAGTTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAAATGAACGAAATGTTTTCCGAGGACGAGCAGAGTCATTTATTGCACGGATGCATCTTGTACAAGGAGACAGACGCTTTTCGCGATGGAAAGGATCAGTGGTGGATTCAGTAGTTGGAGTTTTCCTCACTCAAAATGTATCAGACCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATTTCCGATAAAGCCAAGCAGCAAGTGCGATACATGCCATGATGAAAGTGCAAGCATGATAGTCAACTCACCAGAGGTGCAGATTGTGGAACCAGAAGAAAATGCAAAGCTGGAAGAAATATTGAATCAATCTGTTCATGAATTGAGTTCTATGACAAAAGACATCATTGAACATTCTGAAGAAAGAGAAACTGTTGACAGCAACAGCATTGATTCCTGTGGAACTACTGGCAGCTTAAAAGATGAATCAAATTGTAAGATGTCGGAACCAGCTCAAAGAAATATTAGCGAACATAGTACAGTGGAATTTGTTAGTCCTGTGACTGGGGAAGGGCGAGAAAATTCATGTAATGGGGGTGTTAGGAAAGAGTTAAATGCTTTATTTTCATCCCATTGCTCCATTGTTACATCTCAATTGTCTGGAGATTTTTCCATTGATCAAAATCCTGGGAAGATAGGATCAGTCTCAGACAGCAACGCAGAAGTAGAAGATCGGCTAAGCACAGCCGAATACAATGTTTCCAACAGGACTTCTTTCAGTAATCTTTTAGGATTGGCAAGTTCGACGCAGTTGCATGAAGTTAACAGTCAGAGAAACAATCTAACTGAGAATTCGAGAGATTCATATGGTCAGCCTGTAGCGACGCATGTCAACTTGGAGGAGAACTTGGAAAAATCAAATGCTACTCAAAGCTATTTAGAAGCAATCACGACACAGGGTAATGACTATAATTTGAAAATGACCCCCAACTCTGGAGTTCTTGAAGTCAACTGCTATAATCCCATCAATGTCGATGCCTCGTCAAGTGGCTCCTCAAAGAATAAAAATGAAGATAACATAAACTTGAGTTCTCCAGCAGAGTCTCACAGCATGCTATCCGAGGCCCATCTTCAGCAGCTTAGTGATCACAAGCAGCACGAGGCTTTCCATATTTCTGGACAAAGTCAAGATCTTACGCCGAAATCAAAGGAATCAGATTCTTGTGACCACAGCTATGCCATTACGAATGAAAACAGTAAGTTAGATTCTGCTCCTGTAAAATCAAAAGGCAAGAAAGATAAAAAGGATAGCTTCAATTGGGATAGTTTAAGAGTACAGGCGCTAGCTACAGCAGGGGAAAGAGAAAAGACAGAAAGCACCAAGGACTCTTTGGACTGGGATGCCGTGAGGCGTGCAAACGTCAATGAAATTGCTGATGCAATTAAAGAACGGGGCATGAACAACATGCTTGCTGAACGTATTCAGAGTTTCCTGAATCTACTTGTTGATAAACACGGGGGTATAGATCTCGAGTGGTTGAGAGATGTCCCACCTGACCAAGCAAAAGAATTCTTGCTCAGCATAAGGGGATTGGGATTGAAAAGTGTGGAGTGCGTGCGACTATTAACACTGCACCATCTTGCTTTCCCGGTGGACACAAATGTTGGGCGTATTGCAGTACGCTTGGGATGGGTACCTCTCCAGCCACTGCCAGAATCATTACAGTTGCATCTTCTAGAATTGTACCCAGTGTTGGAATCCATACAAAAGTATCTCTGGCCTCGGCTGTGCAAGCTTGATCAAAGAACATTGTACGAGCTGCATTACCAGCTGATTACGTTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGTCCAATGAGAGGGGAATGCAGACACTTTGCAAGTGCTTTTGCAAGTGCAAGGCTTGCCCTCCCAGGACCGGAGCAGAAGAATTTAGTTATTGCAACTGGTAACAATGCAACTGATCAGAACCCATCAGTAAACATCAATCATTCGCCATTGCCTCTCCCAGAACCGGAGCAGAAGGATATAGATATGACATCTGGAAACAATTCAACTGATCAGAACCCATCAGTAATCATCAATCATTTGCCCTTGCCTCTCCCAGAACAGGTGCAGAAGAATATAGATATGACAACTGGAAACAATACAACTGATCAGAACCCATCAGTAATCATCGATCAGTTGCCTTTGCCTCTCCCAGAACCGGGTCAGAAGAATATAGATATGACAGCTGGAAACAATACAACTGATCAGAACCCATCAGTAATCATCAACCAGCTGCCCTTGTCTCTCTCTGAAAACACAGGCCAAGCAGAAGAACTTCTACAAACAGTTGCGATCAGGCAACATGAAACAAACTCTGAAATCAACATCTGCCAACCAATTATTGAAGAGCCAGCATCTCCAGAGCCAGAATGCTCCCATGTTTCTGATAATGATATAGAGGATGCTTTCTATGAGGATCCCGATGAAATTCCGACCATCAAACTAGACCTAGAAGAGTTCACTGTGAATTTACAAAATTACATGCAAACAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTTGCTCTAAATCAAGAAGCTGCTTACATTCCTACACCGAAGCTGAAGAACGTGAGCCGGTTGCGCACAGAGCATTCTGTTTATGAACTCCCAGATTCACATTGTCTTCTGGAAGGGTGGGAAGTGCGGGAACCTGATGATCCAGGCAAATACCTTCTAGCTATATGGACCCCAGGCGAGACAGCAAATTCCATAGAGCCACCGGAAAGAAAGTGCAGCGCTCAGGGCTGTGGCCAGCTCTGTAATGAGGAGGAATGTTTTTCATGCAACAGCTTCCGGGAAGCAAGTTCGCAGATGGTTCGAGGGACAATCCTGATACCATGTCGAACAGCAATGAGAGGGAGCTTTCCGCTAAACGGCACCTATTTTCAAGTCAATGAGGTTTTCGCGGACCATGAATCAAGTCTTAACCCAATTAGCGTTCCCAGAAGTTGGATATGGAACCTCAATAGGAGAACAGTACACTTCGGAACCTCCATACCGAGCATATTCAAAGGTTTATCAACACAAGAAATTCAACAGTGCTTCTGGAGAGGCTTTGTCTGTGTCCGAGGATTTGACCGGCAAACGCGAGCACCCCGTCCTCTAAAAGCTAGACTACATTTCCCAGCAAGCAAACTAGCCAAGAACAAGGAGCAGGCCAAGAAAGACACCAAAGCAGCAAACTCACAAGGAGTGAATCTAAAATCAAATACAGAACAGCAGCCAGAATGTCTCGCCAGCATTCCCAACTTGCAGCCAAACAACGGCGGATCCTGA 5559 0.4328 MEFGETEKRKVNSEVPWIPTTPFKPIAQRPEQICNTGERNQLNSHFNGEFVSLESSGGGDVNNRSEFVESVAGTSNIGHDNARTRVQVSFDDVPGPSNSSFAELLAQAGAPSAYANSRYSFLENQFVSGVWNSQFEQSYALLGNHNLYQQQQQLYNNFIQDNYQDPRGTSYMGYYGQTNSQVALPPENVVTAKDKQVVETQICMEQVDQREDEDNASATMCNNSQNKLYDPAAVVDLTAIPTPCKEDNNPNKEIHHVIDLNEIPQTKPKRRKHRPKVIKEGKPKKPRKPPTPKPDQSKENSTQKRKYVRKKDLNTTPAEVPGECNEQLIAESAKKTCRRSLYFEIPEQPRDGNFACREENATMQFGGETGVEVQKTQALNNYMSSREDAQASTSNGRFSSNASQEVGSQRKPSGAIKQADNGSVNLIGAQYNLLQAYQSRYWVQFPNVQKKRRSEKVKFSNTANTSSMTATKDVQITTCSEENARSYQDASTSNGWTSASASEYETAKLLTMLRAAESATCDKSQSLEYNLFSGQSRPTKKRSRVTSRAHDYTSLAIVRNCDAKLNNIANQSSSGRKTFEDAQRPQTGIDALVAEMRASLTKKKRSKKRSVSINSTYSSRDEMQQHLPSHSSLGVARGESWKSIYTVDTLTQQFSQLSIYREARELVLYGQNALVSYKQKTLKRKGRRVQEYGTMIPYEGVFDPIKKQRPRPKVDLDEETNKVWKLLMLDINSHGVDGTDEDKAKWWENERNVFRGRAESFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPIKPSSKCDTCHDESASMIVNSPEVQIVEPEENAKLEEILNQSVHELSSMTKDIIEHSEERETVDSNSIDSCGTTGSLKDESNCKMSEPAQRNISEHSTVEFVSPVTGEGRENSCNGGVRKELNALFSSHCSIVTSQLSGDFSIDQNPGKIGSVSDSNAEVEDRLSTAEYNVSNRTSFSNLLGLASSTQLHEVNSQRNNLTENSRDSYGQPVATHVNLEENLEKSNATQSYLEAITTQGNDYNLKMTPNSGVLEVNCYNPINVDASSSGSSKNKNEDNINLSSPAESHSMLSEAHLQQLSDHKQHEAFHISGQSQDLTPKSKESDSCDHSYAITNENSKLDSAPVKSKGKKDKKDSFNWDSLRVQALATAGEREKTESTKDSLDWDAVRRANVNEIADAIKERGMNNMLAERIQSFLNLLVDKHGGIDLEWLRDVPPDQAKEFLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKNLVIATGNNATDQNPSVNINHSPLPLPEPEQKDIDMTSGNNSTDQNPSVIINHLPLPLPEQVQKNIDMTTGNNTTDQNPSVIIDQLPLPLPEPGQKNIDMTAGNNTTDQNPSVIINQLPLSLSENTGQAEELLQTVAIRQHETNSEINICQPIIEEPASPEPECSHVSDNDIEDAFYEDPDEIPTIKLDLEEFTVNLQNYMQTNMELQEGEMSKALVALNQEAAYIPTPKLKNVSRLRTEHSVYELPDSHCLLEGWEVREPDDPGKYLLAIWTPGETANSIEPPERKCSAQGCGQLCNEEECFSCNSFREASSQMVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHESSLNPISVPRSWIWNLNRRTVHFGTSIPSIFKGLSTQEIQQCFWRGFVCVRGFDRQTRAPRPLKARLHFPASKLAKNKEQAKKDTKAANSQGVNLKSNTEQQPECLASIPNLQPNNGGS 1852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 1808 1852 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 1074 1107 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 1819 1852 - -
Vivi6g05798 1852 SMART ccc3 1347 1367 IPR003651 GO:0051539
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 603 632 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 872 893 - -
Vivi6g05798 1852 Pfam Permuted single zf-CXXC unit 1668 1698 IPR028924 -
Vivi6g05798 1852 Pfam RRM in Demeter 1702 1802 IPR028925 -
Vivi6g05798 1852 SUPERFAMILY DNA-glycosylase 756 1369 IPR011257 GO:0003824|GO:0006281
Vivi6g05798 1852 Gene3D - 1276 1364 IPR023170 -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 611 631 - -
Vivi6g05798 1852 SMART endo3end 1180 1346 IPR003265 GO:0006284
Vivi6g05798 1852 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1472 1814 IPR044811 GO:0019104|GO:0035514|GO:0080111
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 1392 1411 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 248 266 - -
Vivi6g05798 1852 CDD ENDO3c 1194 1312 IPR003265 GO:0006284
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 877 893 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 385 419 - -
Vivi6g05798 1852 FunFam DNA glycosylase/AP lyase ROS1 1268 1376 - -
Vivi6g05798 1852 Coils Coil 1804 1824 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 241 320 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 284 313 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 267 283 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 1074 1115 - -
Vivi6g05798 1852 Gene3D Hypothetical protein; domain 2 1187 1275 - -
Vivi6g05798 1852 MobiDBLite consensus disorder prediction 1143 1165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05798 Vivi-Chr6 165011639 165021385 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05798 - - vvo:131610999 3622.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05798 6 165011639 165021385 Vivi6g05798 6 165011639 165021385 ECH