Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05769 ATGGAGGTCTCAGTCTCAGACGACGACGATCTCGTTATCCTCGTTTGCACTAACCCTAACGAACCAATTCAAACAACAAACCTCATCAACCAAGAGATTCTCCTTTCAACCACCGATATCCTCGATTCCGATTTAACCTCATTTCTCACTTTTCATACTATCAAAATTCAGACACATCGCAACAGACTCATTGAGCAATCGTTGTATTTTCGAGGCCTCCTCAGCGGAAGCTTCAGTGAATCATGCTCGGGCTCTATCACTATCAACTGGAATCTGTTTGTGTTTATGCAAATTCTTAAGCATATGTCTGGCTTTCCATTGGATATTACTACCGAAAATATCCTCCCTCTTTACGAGGGTGCACTTTATTTTGGAGTGGAGACACTTCTCTTAAAGTGTGAGACTTGGTTTTCTGAGGTATTCTCGCCGGAAGGATTTCAATTAATGCAGATACAAATGGAGGATTTGATTCAAATTTGGAAATTTAGCTTGGATCATGCTAGTGATTTCATTCTTCACTTGTGTATCGGCTACCTAGCAAGAAATTTTATGTGGGCAAAGCAGAACAATTTGTTTGGAAAAATTCCATATAACTTGCTGTTATCTTCAGTAAAGCATCCTCATTTGACCGTTGACAGTGAGATGCATCTTTCTGATGCACTTCTTCTTTGGCTTGAAAGTAACATGGAAAATTTGGAGATGCGGAATGAAGCAGAAGACAACTATAATGCAATTTTAAAACAAATTCGTGTGGACCTTTTGCCTTTGTGGTTTGCTGCAGGAAAAAGAAATTCTTTTTATTTTAGGCAGCTGGCTGAGGAAAGCCTTGGTTCAATTTTCAGAGCACTGAATATTCTACCTATAGGTTACCTTGATATTTCCAGATATAGTGACTTGCAACATCTCAGGATTCGAGTTACAGAATATTCAAAGAAAATAGACCTTTCCAGTTGTCCGCAATTAACATCTGCAATACTGCTTCTATCACTCATACCTGTACCGTATTTCACGGATCCCATGCAAAGGAAGACTATAGAACAGTTCTTTATTAGTTCTGGACATCCTAGAAGAGAGAATTATGAATTCCCACAAAAACTGTTAGATACCTTTATCTTTGAAGCAGTTCAGGAGGTGGATATCTCAAAGTGTCGAAGACTGCTTATTGAACATGCTGTTGATTACTTCAGCCAGTCCTTTCCTTCCTTAAAAATATTAAAAGCAAGTTATCTATTAAATATCAGGACTACCGGTTTCCTTCAGTTATTAAAGAAATGCTCTTTGGTCAGCGAAATTGACTTGACTGTTGATATTACTCCTCTTATTCCAACATCTGTTACAGTTTTATTCTCTAGTCCTGCTGTGATACCACTGGTACCAGAGAAGACCTCAAGTCTTAAATATAAACCAGTGGAAACCATGTCATTTCATGAATCTAGACCTATTATTTCTTATGTTACGAAACTCACATTGGAAGGAAGAACTGATGTCGATGACTTGAGTCTCCGGTATATCTCCAAATTCTGCGTTTCATTGTGTCACTTGAATATTAAAGGATGTATTTATGTCACTGATATTGGCATATCAGATCTCATAGGCAGATGTAAAAATCTTAATTCGATTGTGGTATGTGATACTTCATTTGGGATAAATTCAGTTCAAGCTCTTTGCCCAGCTATTTCTGATGGTGGCAACTTTCCCTCTTTACACTCTAGAGACGACCATTTGAATTCTGTGGCGTATAATCTTCAATCTCTGCATATGGGTGGATGCATAGGTATTTCTGAGTTATCTCTGCAAGAGCTTATGTCTCAAACACAAGTTTTGAAGAGTCTATGCCTGAGTGGGACATACCTGGTTGACCAAGCATTATATAATTTCAAAGGCTCTTCCTTGGAGATGCTTGATGTGTCAGACACCAAGATTTCTGAAGCTGCATTAAGTTATGTTATTCATGGAAATCCAAATTTGAAGAGTCTGAAAGCAAGAGGTTGTCAAAATTTGTTAAAAGGAGATAGTTCTATTGAAAAGAGAGAATCTGGCTTTTCCTCCTTGCATGAAGAACTACATGCTGAGCTAGGAAAGAAGTGTAGATTGGAAGAACTTGAATTTGGCTGGGGTTTTTCTTCCTTCTCTCTCAGTGCTTTGGAACCTGCACTGACATCATTAAAGACCATCAGTGTAGGTTTAGGGGGAATGCTAGGTGAAGATGCACTGAGACAGCTACCAGAAATCTGTCCCCTGCTAGAAACAATAATCCTTCATTTTCAGGTAATATCTGATATTATCGTGACGAAATTGATTATGACCTTGGTGAAGTTACAAGTATTAGCTCTGTGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAATTCCCTATGCAAAATCTAAGAAAGTTGAGGCTTGAAAGAGTTACCCCATGGATGACCAATGATGATCTGGTTATTTTATCTCAAAACTGTAGAAATTTGGTAGAGCTTTCATTGCTTGGTTGCCCTCTTCTTAACTCAGATTCTCAACAGATAATTTCACGTGCATGGCCAGGCTTGGTCACTATACATCTAGAGGAATGTGGAGAAATAACAGCAAATGGGGTCTCGGCTCTTCTTGACTGCAGAGCTCTTGAAGATCTTCTGTTGCGTCATAATGGTCCTGGGCTACAAAGAAACTTCATTTTTCATGCCGCTTCAGAGATGCCATTGCTTCGAAAATTGTCACTGGATATATGTGATGCAAGTGAAGGTGATTTTGACATTCCAAATTATGCAGATAGATGCTTTTTGAGTACCTTGAAGATAGCAAGATGCAAATCTCAAAGATGCGCATTTCATCTCCCAGTCCCTTCCTCAGGAAGTAGCAGACGATCAGTGCATGTAGAAACTCTCGTGCTTGTGTGGAACAGCAAAAATCTCACCAGAACAGTGGTGAAGGAAAGGCTTTAG 2943 0.3897 MEVSVSDDDDLVILVCTNPNEPIQTTNLINQEILLSTTDILDSDLTSFLTFHTIKIQTHRNRLIEQSLYFRGLLSGSFSESCSGSITINWNLFVFMQILKHMSGFPLDITTENILPLYEGALYFGVETLLLKCETWFSEVFSPEGFQLMQIQMEDLIQIWKFSLDHASDFILHLCIGYLARNFMWAKQNNLFGKIPYNLLLSSVKHPHLTVDSEMHLSDALLLWLESNMENLEMRNEAEDNYNAILKQIRVDLLPLWFAAGKRNSFYFRQLAEESLGSIFRALNILPIGYLDISRYSDLQHLRIRVTEYSKKIDLSSCPQLTSAILLLSLIPVPYFTDPMQRKTIEQFFISSGHPRRENYEFPQKLLDTFIFEAVQEVDISKCRRLLIEHAVDYFSQSFPSLKILKASYLLNIRTTGFLQLLKKCSLVSEIDLTVDITPLIPTSVTVLFSSPAVIPLVPEKTSSLKYKPVETMSFHESRPIISYVTKLTLEGRTDVDDLSLRYISKFCVSLCHLNIKGCIYVTDIGISDLIGRCKNLNSIVVCDTSFGINSVQALCPAISDGGNFPSLHSRDDHLNSVAYNLQSLHMGGCIGISELSLQELMSQTQVLKSLCLSGTYLVDQALYNFKGSSLEMLDVSDTKISEAALSYVIHGNPNLKSLKARGCQNLLKGDSSIEKRESGFSSLHEELHAELGKKCRLEELEFGWGFSSFSLSALEPALTSLKTISVGLGGMLGEDALRQLPEICPLLETIILHFQVISDIIVTKLIMTLVKLQVLALCYCFGDISMSSFKFPMQNLRKLRLERVTPWMTNDDLVILSQNCRNLVELSLLGCPLLNSDSQQIISRAWPGLVTIHLEECGEITANGVSALLDCRALEDLLLRHNGPGLQRNFIFHAASEMPLLRKLSLDICDASEGDFDIPNYADRCFLSTLKIARCKSQRCAFHLPVPSSGSSRRSVHVETLVLVWNSKNLTRTVVKERL 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05769 980 Pfam BTB And C-terminal Kelch 157 258 IPR011705 -
Vivi6g05769 980 CDD BTB_POZ_ZBTB_KLHL-like 43 124 - -
Vivi6g05769 980 Gene3D Potassium Channel Kv1.1; Chain A 31 170 IPR011333 -
Vivi6g05769 980 SUPERFAMILY POZ domain 51 137 IPR011333 -
Vivi6g05769 980 Gene3D - 177 277 - -
Vivi6g05769 980 PANTHER UNCHARACTERIZED 288 675 - -
Vivi6g05769 980 SUPERFAMILY RNI-like 688 912 - -
Vivi6g05769 980 SUPERFAMILY RNI-like 482 726 - -
Vivi6g05769 980 Gene3D Ribonuclease Inhibitor 568 943 IPR032675 -
Vivi6g05769 980 Gene3D Ribonuclease Inhibitor 376 567 IPR032675 -
Vivi6g05769 980 SMART LRR_CC_2 508 533 IPR006553 -
Vivi6g05769 980 SMART LRR_CC_2 847 872 IPR006553 -
Vivi6g05769 980 SMART LRR_CC_2 794 820 IPR006553 -
Vivi6g05769 980 SMART LRR_CC_2 821 846 IPR006553 -
Vivi6g05769 980 SMART LRR_CC_2 579 604 IPR006553 -
Vivi6g05769 980 ProSiteProfiles BTB domain profile. 43 111 IPR000210 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05769 - - gmx:100791594 1427.92