Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05764 ATGGATTTCTCTCCCTTTCTCCTCTCTTTCATTTTCATCATTCTACATCTCTCTGGACAAAGAGTTGTACAAGGTGAAGTTGATATTCAACACTATCATCGTCTTCATAATGAGCCTATAACAAAATTGTTTGTGTTTGGAGATTCATATGCTGACACAGGTAACATCAAAAGAGGTTTTGCTCCTTCATGGAAACATCCTTATGGTGTCACCTTCCCCGGCAAACCCGCCGGCCGTTTCTCCGACGGCAGAGTCCTCACCGACTTCATTGCCAAGCATTTGAAACTGCAACCACTGGCATCATACAGGATAAGAAAACATTTGGCACCACATCGTTTGAAAAATGGAATGAGCTTTGCATTTGGAGGTACTGGTGTGTTTGAGACATTGAATCCAGGTCCAAACTTGACAACTCAGATCAGTTTTTTTCAAAATGCAATACAAGACAAAGTATTCACAGCCTCAGATGTTAGAAATTCAGTTGCTCTTGTTTCTGTCGCTGGCAATGACTACACTCGTTACAATGTCAAAAATGGCTCTATCCAGGGTTTACCATCATTCGTATCATCAGTGGTGAATCAAACAATCACAAATGTAATTCGCATCAAAGAATTAGGAGTGAGAAAAGTGATTATATCAAATCTACAACCAATTGGATGTTTACCAGCAGTAACAGCTTCATCTTCATTCAAACTATGCAACGAAACAACAAACGACCTCCTCGTAGGTTACCATAACACGCTCTTAACCGACGCTGTCACAAAATTGAACCAGCAAATCAATGATAATTCTTCAGTGCCCTTTATAGTTCTTGATCTATACGATAGTTTCATGTCGGTGTTGAGGTCTCCAAGCACACACAACATTAAGAATGAGTTGGTACCTTGTTGTAATGGAGTGAGTAGTAAGTATTTTTGTGGAAGTATTGTGAAGAAGGTTAAGAAGTATACGGTTTGTGAGAATCCTAAGTCTGCTTTCTTTTGGGATTTGGTTCATCCTAGTGATGCAGGGTGGCAGGCTGTTTATACAAGGCTAAGAATATCGAATGCTCTTGAACAGATTCATTACTAG 1071 0.3978 MDFSPFLLSFIFIILHLSGQRVVQGEVDIQHYHRLHNEPITKLFVFGDSYADTGNIKRGFAPSWKHPYGVTFPGKPAGRFSDGRVLTDFIAKHLKLQPLASYRIRKHLAPHRLKNGMSFAFGGTGVFETLNPGPNLTTQISFFQNAIQDKVFTASDVRNSVALVSVAGNDYTRYNVKNGSIQGLPSFVSSVVNQTITNVIRIKELGVRKVIISNLQPIGCLPAVTASSSFKLCNETTNDLLVGYHNTLLTDAVTKLNQQINDNSSVPFIVLDLYDSFMSVLRSPSTHNIKNELVPCCNGVSSKYFCGSIVKKVKKYTVCENPKSAFFWDLVHPSDAGWQAVYTRLRISNALEQIHY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05764 356 Gene3D SGNH hydrolase 30 350 IPR036514 -
Vivi6g05764 356 Pfam GDSL-like Lipase/Acylhydrolase 43 341 IPR001087 GO:0016788
Vivi6g05764 356 SUPERFAMILY SGNH hydrolase 42 343 - -
Vivi6g05764 356 PANTHER OSJNBB0059K02.9 PROTEIN 27 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05764 Vivi-Chr6 164239819 164243507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05764 40 336 Acyl Lipid Metabolism Gene Families AT4G10950 27.726 9.39e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05764 - - psat:127128969 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05764 6 164239819 164243507 Vivi6g05764 6 164239819 164243507 ECH