Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05754 ATGGGAACCCATTTTCCGAATCGGAATCTCTTGGTTTTGGTTATCATCGGAATATGCTTAGGATTTGACGCTGTTCATTGCTATGAACGTCCACCGGCTCGTAAAACCGTATTTGTTCCTCAGGACGACGATGATTCTGCGCCACAACAGGTACATATATATCAAGTTGGCCAAAACAAGATGGGAATATCTTGGATCACAGAAGACTCAACTCCTGCAACAGTGAAGTACGGTCCATCTCCTTCAGCAGATGCATCTTCTGCCACCGGAACCACCTCTTCTTACCATTATACTGGTTATCAATCTGGTGAAATTCACAACGTTGTAATTGGTCCCCTCAACCCCAACACTGTCTACTCCTACAAGTTAGGTGACTCCCCTAAAACATACACTTTCAAAACCACACCTAACCAACTTCCAATCAAGTTTGCAGTAATTGGAGATCTTGGACAGACAGAAGATACAAGTTCAACACTTGATCATGTCAGTAAATCAAATTACGACATGTTGTTATTACCCGGTGACTTATCCTATGCTGATTTTCTACAGCCTCTATGGGACTCTTACGGTCGTTTGGTTGAACCATTAGCGAGCCAACGTCCATGGATGGTCACTCAAGGTAACCACGAAGTCGAGAAGATTCCAGTCATCCATCCTACACCATTCACAGCATACAATGCAAGATGGAAAATGCCGTTTGAAGAGAGCGGATCAGACTCTAACCTTTACTACTCTTTCGATGTGTCTGGTGTTCATGTCATAATGTTGGGATCTTATACCGATTTTGACAAAGACTCGTCGCAATATAAGTGGCTTCAAGGCGATTTACAGAAGATAAATAGAAAAAACACTCCTTGGGTAGTGGTGTTGGTTCATGCTCCATGGTATAATACTAATGAAGCTCATCAGGGTGAAGCTGAATCGGTTGACATGAAGGCTTCTATGGAAGGTTTGCTTTATAATGCTCGGGTTGATGTTGTTTTTACAGGACATGTTCATGCTTACGAACGCTTTACTCGAGTTTATAATGATAAAAGCGATAACTGTGGTCCGGTGCATATCACCATCGGAGACGGAGGCAATCGTGAAGGACTAGCCTCAAAATACCAGGATCCTAAGCCAGATATATCATTGTTCAGAGAGGCTAGCTTTGGACATGGGTTATTAGAAGTGGTTAATGCGTCACATGCACTTTGGACATGGCATAAGAATGATAATGATGAGTCTGTTGTTAGTGATTCTGTTTGGCTAACAAGCTTATCCTCTAATACCGCTTGTAAAGCGTGA 1287 0.425 MGTHFPNRNLLVLVIIGICLGFDAVHCYERPPARKTVFVPQDDDDSAPQQVHIYQVGQNKMGISWITEDSTPATVKYGPSPSADASSATGTTSSYHYTGYQSGEIHNVVIGPLNPNTVYSYKLGDSPKTYTFKTTPNQLPIKFAVIGDLGQTEDTSSTLDHVSKSNYDMLLLPGDLSYADFLQPLWDSYGRLVEPLASQRPWMVTQGNHEVEKIPVIHPTPFTAYNARWKMPFEESGSDSNLYYSFDVSGVHVIMLGSYTDFDKDSSQYKWLQGDLQKINRKNTPWVVVLVHAPWYNTNEAHQGEAESVDMKASMEGLLYNARVDVVFTGHVHAYERFTRVYNDKSDNCGPVHITIGDGGNREGLASKYQDPKPDISLFREASFGHGLLEVVNASHALWTWHKNDNDESVVSDSVWLTSLSSNTACKA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05754 428 PANTHER ACID PHOSPHATASE RELATED 27 418 IPR039331 GO:0003993
Vivi6g05754 428 Gene3D - 47 137 - -
Vivi6g05754 428 Pfam Calcineurin-like phosphoesterase 142 335 IPR004843 GO:0016787
Vivi6g05754 428 CDD MPP_PAPs 140 419 IPR041792 -
Vivi6g05754 428 Pfam Iron/zinc purple acid phosphatase-like protein C 350 410 IPR025733 -
Vivi6g05754 428 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 136 IPR008963 GO:0003993|GO:0046872
Vivi6g05754 428 Gene3D - 138 426 IPR029052 -
Vivi6g05754 428 SUPERFAMILY Metallo-dependent phosphatases 140 408 IPR029052 -
Vivi6g05754 428 Pfam Purple acid Phosphatase, N-terminal domain 48 134 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05754 Vivi-Chr6 164126368 164129449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05754 48 389 Miscellaneous Gene Families AT1G13900 27.670 4.80e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05754 K22390 - gmx:100794764 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05754 6 164126368 164129449 Vivi6g05754 6 164126368 164129449 ECH