Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05743 ATGGAGAATCTACCTGTTGAAGTGATTGGTATCATATTATCCTGTATCGGTTCTGCTAGGGATATTGTGATTGCATCCCTAACTTGCAAAAAATGGAGTGAAGCTTGGCACAATCACCTCCACACTCTTTCATTCAACACATCTGATTGCCCTCTATATAGTGAAATTTGCTCTGGTCATTTGCAAATGGTCATCACTTGTACACTTTTTCAAACCAAAGGGTTACAGTGTTTAACTATTTTAATGGATGATGAGCATGAGTTTGCTGTGACTCCTGTCATTGCTTGGCTTATGTATACAAGGGATTCGTTGCGCGAGCTGCGTTATAATGTGAGGGCATCTTTTAATTTCAATATAATTGAGAAATGCAGCAGGCAGAGGTTGGAGGTTTTGTCGTTGGCTCGGAATTCTATCTCGCGCGTTGAACGGTATCATAAGTTTCCGTGTTTGGTTTCGTTGTCGTTGAGTTTTGTTACTGTATCGGCGTTGGATTTGAGTCTTCTGGTTTCTGCTTGTCCGAAGCTTGAAACTTTTTCTGTAGTTGATCCGGATATCAGTATGTCGGATTCACAGTCTTCCTTAGAGCTTAGTAGCTCTTCTTTGAAGGATATCTATGTTGATTCATTTGGTTGCGATAAGTTTATACTGGAGGCGGGTTCGCTCGAGAAACTGCATCTTAAGGATTGTACCTTTGATGTATTTGAATTGAATGGTAAGGGGAAACTGAAAGTGTTAAAGATTGATGATGCGAGTGTGATCCATCTTGACATTGGGGATAGTACGGAGAATCTCGAGGTTGTTGACGTGTGTAACTTCACAATTATGTGGCCGAAATTCTATCAGATGATCGCGAAAGCGTCGAGGTTGAATAATCTTAGGCTGTGGGGCGTTGTTTTTGATGACGAGGATGAGGTTGTTGATATAGAGAACATTTCTGTTTGTTTTCCTAGACTGACTCACCTTTCCTTGAGCTATGATTTGAAAGATGGAGTGCTTCATTATGGCTTGCAGGGTTTGTCTTTTCTGATGAATGTGACTGTGTTGGAACTTGGATGGACTATGATCAGTGATCTTTTCTCAGTTTGGGTGGCTGGACTCTTGGAAGGATGTCCAAATCTAGAAAAGTTGGTTGTTTATGGTTATGTTGCTGAGGTTAAAACAATTGAAGAGTGTCAAACTTTTGCTAGATTTTCTGAATTCATGGTTCAACTAGGAAAGAAATATAGTCATGTAAAGTTTGAGTTTGAGTATGAGTAG 1257 0.401 MENLPVEVIGIILSCIGSARDIVIASLTCKKWSEAWHNHLHTLSFNTSDCPLYSEICSGHLQMVITCTLFQTKGLQCLTILMDDEHEFAVTPVIAWLMYTRDSLRELRYNVRASFNFNIIEKCSRQRLEVLSLARNSISRVERYHKFPCLVSLSLSFVTVSALDLSLLVSACPKLETFSVVDPDISMSDSQSSLELSSSSLKDIYVDSFGCDKFILEAGSLEKLHLKDCTFDVFELNGKGKLKVLKIDDASVIHLDIGDSTENLEVVDVCNFTIMWPKFYQMIAKASRLNNLRLWGVVFDDEDEVVDIENISVCFPRLTHLSLSYDLKDGVLHYGLQGLSFLMNVTVLELGWTMISDLFSVWVAGLLEGCPNLEKLVVYGYVAEVKTIEECQTFARFSEFMVQLGKKYSHVKFEFEYE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05743 418 PANTHER F-BOX PROTEIN-LIKE 2 380 - -
Vivi6g05743 418 Gene3D Ribonuclease Inhibitor 73 397 IPR032675 -
Vivi6g05743 418 SMART fbox_2 4 45 IPR001810 GO:0005515
Vivi6g05743 418 SUPERFAMILY RNI-like 123 381 - -
Vivi6g05743 418 CDD F-box_SF 2 35 - -
Vivi6g05743 418 SUPERFAMILY F-box domain 2 42 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05743 Vivi-Chr6 163904673 163906367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05743 - - gmx:100792331 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05743 6 163904673 163906367 Vivi6g05743 6 163904673 163906367 ECH