Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05729 ATGTTAATTTCTCTTTGCAACCCTTCTCTTTCACTTCAATCGGTCTCAATTCACGGAAAACCTAACAAGAAAATAATCTCAATCACCAACTCTGCATCTTCCGAAAACAGAATAAGCACCCAGCGAAGAACTATCTCAGCATTTGAAGCTCGAATCTCACTCATCTTCGCTCTCGCTTCGCAATCCACATCTCTCTCCCAACGACTTGTTGCTGATTTGGCTAACGAGACTGCTAAATACTTGTTTCCAAAAAGATTTGAGAGTCAAACTCTCGAAGAAGCATTGATGACAGTTCCGGATCTTGAGACTATCAAGTTCAAAGTTCTGAGTAGAAAGGATCGGTATGAGATTAGGGAAATTGAGCCTTACTTTGTAGCAGAGGCTACAATGCCTGGGAAGAATGGGTTTGATTTCGGCGGTGCTTCTCAGTCATTTAATGTTCTTGCTGAATACCTTTTCGGTAAGAATACAACGAAGGAAAAAATGGAAATGACTACACCCGTTTTTACCAGTAAGAATCAATCCGACGGGGTTAAAATGGATATGACAACTCCTGTGTTAACAACAAAGACGGGAGATCAAGATAAATGGAAAATGTCTTTCGTCTTGCCTTCAAAGTACGGTTCTAACTTGCCACTGCCTAACGATTCCTCTGTGACAATTAAAGAAGTGGCTACAAAAATAGTTGCTGTAGTTGCCTTTTCAGGTTTTGTAAATGATGAAGAAGTTAAGCGGCGTGAACTGAAATTGAGAGAAGCTTTGAAAAATGACAGACAATTCAAAATTAAAGAGGGAACTTCAGTAGAAATTGCGCAGTACAATCCCCCATTTGCTCTTCCATTTCAACGCCGTAACGAGATTGCATTGGAAGTGGAGTGGAAAAATCAGTAG 891 0.4029 MLISLCNPSLSLQSVSIHGKPNKKIISITNSASSENRISTQRRTISAFEARISLIFALASQSTSLSQRLVADLANETAKYLFPKRFESQTLEEALMTVPDLETIKFKVLSRKDRYEIREIEPYFVAEATMPGKNGFDFGGASQSFNVLAEYLFGKNTTKEKMEMTTPVFTSKNQSDGVKMDMTTPVLTTKTGDQDKWKMSFVLPSKYGSNLPLPNDSSVTIKEVATKIVAVVAFSGFVNDEEVKRRELKLREALKNDRQFKIKEGTSVEIAQYNPPFALPFQRRNEIALEVEWKNQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05729 296 PANTHER HEME-BINDING PROTEIN-RELATED 90 170 IPR006917 -
Vivi6g05729 296 Gene3D Regulatory factor, effector binding domain 100 173 IPR011256 -
Vivi6g05729 296 Gene3D Regulatory factor, effector binding domain 174 296 IPR011256 -
Vivi6g05729 296 Pfam SOUL heme-binding protein 172 289 IPR006917 -
Vivi6g05729 296 Pfam SOUL heme-binding protein 101 170 IPR006917 -
Vivi6g05729 296 SUPERFAMILY Probable bacterial effector-binding domain 172 291 IPR011256 -
Vivi6g05729 296 SUPERFAMILY Probable bacterial effector-binding domain 96 172 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05729 Vivi-Chr6 163797022 163801178 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05729 - - psat:127125647 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05729 6 163797022 163801178 Vivi6g05729 6 163797022 163801178 ECH