Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05720 ATGAAAGCGAAAATGAAAAAGAAGTTAAAATCCCATAAACTCACAGACACTAGAAGAGCTGCTGCTGAGGTGAAGAGTGAAAGTTTTGAGCAACAAACCTGGGCCGATCTCCCTGTTGAACTCTTAGAATTGATCTTCTCCGGTTTAATTGTGGCGGATAACATTCGTGCTTCTATTGTTTGCAAGAGATGGCATTCAGTTGCCACTTCTGTACGTCAAGTGAACCAACCACCCTGGCTTATGTATCTTCCACAAAATGGTAACCGGGTGCATCGAAAAACCATTGACTTCTATGATCCTGGGCATCGAAAAGCCTATTCCCTCGACTTTCCACAGTTAGATAGGTCCCGTGTTTGCTATTCAAAAGATGGTTGGTTATTGGTATATAGGAGGTATACATGGCCCGAAAGTTCCCTGTTTATTTTCTTTAATCCCTTTACTAGGGAGCTGATCAAGCTGCCAGAATTTGATTATCCAAGCTCTGTTGCCGCCTTCTCTTGTGCTCCAACATCAACTGAATGTGTGATATTTACTATTAAACATGTTAGTTCTACTATAGTAGCGATTAGCACATGTTATCCTGGGGCAAACAAATGGACAACTGTTAATTACCAAAACTGCTCTCATTTTTCCTGTTGCTTAAGGACTAAGGTTGTCTTTTCTAATGGGTTATTTTATTGTCTGAGTAACCAAGGTTTTCTAGGGGTGTTTGACCCAGTTGAATGTACTTGGACTGTTTTGGAAGTACCTCCACCTCGATGCCAAGATAGTTTTATTGATAGACAGGGGCGGAAAGGGAAATTTATGACAGAGCATGAAGGAAATATATTCGTAATTCATATGCTTTGTCCGGAGGGCCCAATTATTTCCAAGTTAGATCAGACACTAATGGAATGGAAAGATGTGAGTACGCTAGACGGCGTGACAGTTTTTGCTAGCTTTTTGTCATCTCCTTCTAGGACTAACATGGCTAAAATAATGAGTAACAGTGTCTACTTACCTAAATTCCGTGTCTATGGAAAGTGTTGCATGTCGTTCTCTCTTGATGAGCAAAGATATTATCCCAATAAGCAGTGTCATGACTGGATTCAACCGGGAACTGTTGAGAACATCTGGATTGAACCACCAAAAGATTTTGCTGGCTGGACTTAA 1152 0.408 MKAKMKKKLKSHKLTDTRRAAAEVKSESFEQQTWADLPVELLELIFSGLIVADNIRASIVCKRWHSVATSVRQVNQPPWLMYLPQNGNRVHRKTIDFYDPGHRKAYSLDFPQLDRSRVCYSKDGWLLVYRRYTWPESSLFIFFNPFTRELIKLPEFDYPSSVAAFSCAPTSTECVIFTIKHVSSTIVAISTCYPGANKWTTVNYQNCSHFSCCLRTKVVFSNGLFYCLSNQGFLGVFDPVECTWTVLEVPPPRCQDSFIDRQGRKGKFMTEHEGNIFVIHMLCPEGPIISKLDQTLMEWKDVSTLDGVTVFASFLSSPSRTNMAKIMSNSVYLPKFRVYGKCCMSFSLDEQRYYPNKQCHDWIQPGTVENIWIEPPKDFAGWT 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05720 383 Pfam F-box-like 34 69 IPR001810 GO:0005515
Vivi6g05720 383 ProSiteProfiles F-box domain profile. 31 82 IPR001810 GO:0005515
Vivi6g05720 383 SUPERFAMILY F-box domain 30 87 IPR036047 GO:0005515
Vivi6g05720 383 SUPERFAMILY Galactose oxidase, central domain 83 257 IPR011043 -
Vivi6g05720 383 Gene3D - 33 72 - -
Vivi6g05720 383 PANTHER OS09G0392200 PROTEIN 17 377 IPR044619 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05720 Vivi-Chr6 163635114 163638168 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05720 - - vvo:131610959 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05720 6 163635114 163638168 Vivi6g05720 6 163635114 163638168 ECH