Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05704 ATGTTCTACAATGGATACTATCATTTGTTCTACCAATACAATCCTAATGGATCTGTTTGGGGAAACATTGTATGGGCTCATTCAGTATCAAAGGATCTTATAAACTGGAAAGCACTTGAACATGCTATTTATCCATCCAAACCCTTTGATAAATTTGGATGTTGGTCTGGGTCCGCGACTATACTTCCGGATAGAGGACCCGTGATCCAATACACTGGAATCATCGATGAAAATAACACCCAAGTCCAATGTTGGGCTGAACCCGAAGATAAAAATGACCCGTTTCTTACAAAATGGGTTAAACCCGATGAAAACAATCCATTTGTGATTGCTGATTTAGATGTGAACGGTAGCGCATTTCGTGATCCAACAACTGCATGGAAGGGTAAAGATGGAAATTGGAGAATATTGGTTGGTAGTAGAGACAAAGATATAGGAATGGCTTATTTGTATAGGAGTTCGGATTTTAAGAATTGGACTCGGGCCAAAAAACCGATCCATTCCGCTAAAACGGGTATGTGGGAATGTCCCGATTTTTACCCGGTTTTATTGAAAGGTAAAAACGGGTTGGATACATCAATTGAAGGTAAACATGTAACACATGTCTTAAAAAATAGTCTTGATATGACTAGATTTGAGTACTATACATTGGGCAAATATTCGTCTAAAAAAGACAAGTATACTCCAAGGAAAAATTCAGTGGATAGTTGGGCTGGACTTAGATATGATTATGGAAATTTCTATGCTTCAAAGTCATTTTTTGATGAAAGTAAGAATCGAAGGGTCCTTTGGGGTTGGGCTAATGAGTCTGATACCAAAGAAGATGATGTAAAAAAAGGATGGGCTGGAATTCAGGCAATACCAAGAACTGTGTGGCTTGATTCTAGCGAAAGACAATTACTAACATGGCCGGTTGAAGAATTGGACACACTTAGAGATAAAAAAGTTACTATGAACAATCAAAAACTTGAAAAGGGTAAACATGTTGAAGTAACTGGAATAACTGCCGCTCAGGCAGATGTAGAGGTGACTTTCTCATTTGCAAACTTGGATAAAGCTGAGGCTTATGATCCAAAATGGGTAAATGCACAAGATCTTTGTTCACAAAAAGGTTCAAAAGTTGAAGGTGGAGTTGGGCCATTTGGTCTTTTGACTTTGGCTTCAGTAAATCTAGAAGAATTTACTCCTGTGTTTTTTAGAGTCTTCAAAGCTCCAAATAAACATGTAGTTCTCTTGTGCTCTGATGCCAGCAGTTCTTCATTGAAGAGTGACCTTTATAAGCCATCATTTGCTGGATTTGTAGATGTGGATTTAGCCACTAATAAGAAACTTTCTCTTAGAAGTTTGATTGATCATTCGGTGGTGGAGACTTTTGGAGAAGGAGGGAAAACCAACATTTTGTCTAGGGTTTATCCTGCATTGGCAGTGACCAATCAAGCTCATTTGTTTGTTTTTAACAACGGTACTGAACCGATCACTGTGGAGAGCCTTAATGCATGGAGCATGAAGAATGCTGATATAAAATGA 1527 0.3831 MFYNGYYHLFYQYNPNGSVWGNIVWAHSVSKDLINWKALEHAIYPSKPFDKFGCWSGSATILPDRGPVIQYTGIIDENNTQVQCWAEPEDKNDPFLTKWVKPDENNPFVIADLDVNGSAFRDPTTAWKGKDGNWRILVGSRDKDIGMAYLYRSSDFKNWTRAKKPIHSAKTGMWECPDFYPVLLKGKNGLDTSIEGKHVTHVLKNSLDMTRFEYYTLGKYSSKKDKYTPRKNSVDSWAGLRYDYGNFYASKSFFDESKNRRVLWGWANESDTKEDDVKKGWAGIQAIPRTVWLDSSERQLLTWPVEELDTLRDKKVTMNNQKLEKGKHVEVTGITAAQADVEVTFSFANLDKAEAYDPKWVNAQDLCSQKGSKVEGGVGPFGLLTLASVNLEEFTPVFFRVFKAPNKHVVLLCSDASSSSLKSDLYKPSFAGFVDVDLATNKKLSLRSLIDHSVVETFGEGGKTNILSRVYPALAVTNQAHLFVFNNGTEPITVESLNAWSMKNADIK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05704 508 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 506 - -
Vivi6g05704 508 SUPERFAMILY Concanavalin A-like lectins/glucanases 304 505 IPR013320 -
Vivi6g05704 508 SMART glyco_32 1 462 IPR001362 GO:0004553|GO:0005975
Vivi6g05704 508 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 316 502 - -
Vivi6g05704 508 CDD GH32_Fruct1-like 1 293 - -
Vivi6g05704 508 Gene3D - 318 502 - -
Vivi6g05704 508 Gene3D Glycosyl hydrolase domain; family 43 1 317 IPR023296 -
Vivi6g05704 508 Pfam Glycosyl hydrolases family 32 C terminal 307 501 IPR013189 -
Vivi6g05704 508 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 304 IPR013148 -
Vivi6g05704 508 SUPERFAMILY Arabinanase/levansucrase/invertase 1 305 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05704 Vivi-Chr6 163381970 163384120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05704 1 503 Glycoside Hydrolase AT3G52600 64.410 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05704 K01193 - gmx:100777418 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05704 6 163381970 163384120 Vivi6g05704 6 163381970 163384120 ECH