Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05702 ATGTTTTCGGCTAGCATTTTGCTGCAGATTCTGGCATGTGCAATATACAACAATTGGTGGCCCATGTTATCAGCTCTGATGTATGTGCTGGTGCCTATGCCTTGCTTATTCTTTGGAGGCGGGTCTACTCATTTTATGATGAGCCGTGAGGGTGGGGGTTGGATGGATGCTGCAAAGTTTTTGACTGGAGCATCAGCTATGGGGAGCATAGCCATTCCTATAATCCTTAAGCATGCTCACATGATTGAGACTGGGGCAATGCTCATCGAGCTTGTATCCTTCTTCATATTTATATGTACAGTTATGTGTTTCCATCAAGCTAGCCTTGACGATGACTGGTAA 342 0.4474 MFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTHFMMSREGGGWMDAAKFLTGASAMGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05702 113 PANTHER LEPTIN RECEPTOR-RELATED 1 112 IPR007262 -
Vivi6g05702 113 Pfam Vacuolar protein sorting 55 2 107 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05702 Vivi-Chr6 163342463 163346549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05702 1 108 EF-hand Containing Proteins AT1G32410 53.153 3.43e-38 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05702 - - psat:127125618 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05702 6 163342463 163346549 Vivi6g05702 6 163342463 163346549 ECH