Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05698 ATGTCTCAGACTAAGAAATTGACGCCGAATTTTGATCAGCACGGCACCAAGTTGCTCAATCTCACTGTTCTCCAACGAATGGATCCATTCATCGACGAGATTCTCTTCACCGCCGCACACGTCACCTTCTACGATTTCAACATCGAGACCAATCAGTGGAGTCGCAAAGATGTTGAAGGATCTCTGTTTGTTGTCAAGAGGAATGCACTGCCGCAGTTTCAGTTTATCGTTATGAATCGCAGAAATACAGAAAATCTAGTGGAGAATCTATTTGATTTTGAGTATGAACTTAAAAATCCATACTTGTTGTATCGGAATGCGTCGCAAGAAGTTAATGGTATATGGTTTTATAATGCTGAAGAATCTGAAGAAGTTGCAAATCTCTTTAATCGGATTCTCACTGCATACCCAAAGGCACCTTCAAATACAACAATGCCTTCTAACCAAAGTGAGTTTCAGGAACATAACCCAGCGTCAGTCATAACCGAAAGCCCTGTAGAGTCATCTTCAGCTGCTGCTACTGCAACTGACGCTACTGGAGATTCTGTATTGGAAAAATTCTTCAATGCACCTAGGTTTGCTGGACCCTATGCTTCTAATGTAGATAGTTTTCAGCAGCCCTACCATTCTGCAAGTGTCACTTCTACTGTTCCCGGTGGTTTTTTGCCTCCTGTACATTCTCTTCAAATGCCATCTACTTCTCTTGAAACAATTAACAGTGGCAATCCGGTTACTAATCTTGTTAAGCCTTCCAATTTTCTTGCACCCAACCCTTTATTATCATTAATTCCACCTGTTTCTTCACCTGTGCCACCTACTGCGGCTGTTCATCATTCCCAAAATCTGCCACACCAATATGGCACTCCACTGCTTCAACCCTTCCCACCACCTAATCCTCCTTCTCTTACCCCTATTTCTATGTCCGTGCCAAATAGTCCGGTTATCAGCAGGGATAAAGTCCGTGATGCACTTTTATCACTGGTTCAGGAGGGTAAATTCATTGACATGGTGTTCGAGACGTTATTGAAGACTCATAATTCATGA 1044 0.4243 MSQTKKLTPNFDQHGTKLLNLTVLQRMDPFIDEILFTAAHVTFYDFNIETNQWSRKDVEGSLFVVKRNALPQFQFIVMNRRNTENLVENLFDFEYELKNPYLLYRNASQEVNGIWFYNAEESEEVANLFNRILTAYPKAPSNTTMPSNQSEFQEHNPASVITESPVESSSAAATATDATGDSVLEKFFNAPRFAGPYASNVDSFQQPYHSASVTSTVPGGFLPPVHSLQMPSTSLETINSGNPVTNLVKPSNFLAPNPLLSLIPPVSSPVPPTAAVHHSQNLPHQYGTPLLQPFPPPNPPSLTPISMSVPNSPVISRDKVRDALLSLVQEGKFIDMVFETLLKTHNS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05698 347 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Vivi6g05698 347 FunFam mRNA-decapping enzyme-like protein 9 135 - -
Vivi6g05698 347 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 12 346 IPR010334 GO:0000290|GO:0008047|GO:0043085
Vivi6g05698 347 Gene3D - 8 135 IPR011993 -
Vivi6g05698 347 CDD EVH1-like_Dcp1 19 133 - -
Vivi6g05698 347 SUPERFAMILY PH domain-like 19 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05698 Vivi-Chr6 163319841 163323769 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05698 K12611 - gmx:100786833 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05698 6 163319841 163323769 Vivi6g05698 6 163319841 163323769 ECH