Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05679 ATGGCACTTATCTTCTTCCACTACAAAATTTTCTTTTTTTCTTTACTTTCTCTTCTTTCCATCACCTTCACTTCTTCCCATATCATACCCAAATTTCCTTCTCCACTTATTCATCCAGAGCAACAGATAAACTCTGCCTCTGTCCAAAATGGTCTTTACGAAACAAAATTCTTCACACAAACACTTGACCACTTCAATTATAATCCACAAAGCTATCAAACTTTTCAACAAAGGTATCTCATCAATGATACCTATTGGGGTGGTGCAAAAAAGAAAGCTCCAATCTTTGTCTACACTGGAAATGAAGGTCACATTGATTGGTTCACTCAAAACACTGGATTCATGTTTGAAAAAGCACCTTACTTCAATGCCCTTTTGGTTTTCATTGAGCATAGATTCTATGGAAAATCAATACCATTCGGAGGGAAAAAGGAAGTTGCATATGCAAATAGCACAACACTTGGATTTCTGAGTTCTGCACAAGCTTTGGCTGATTATGCAACTCTCATAATTGATTTGAAGAAGAATTTGTCAGCAACTGAGTCCCCTGTTGTCGTCTTTGGAGGATCCTATGGAGGAATGTTGGCTGCTTGGTTCAGGATAAAGTATCCACACGTTGCAATTGGAGCTTTATCATCATCAGCTCCAATTCTTCAATTTACGGGTTTGGTTTCACCATATAATTTCGACAACATTGTCACACAGGACTTTAAGAGTGAGAGTGAGAATTGTTACAAACAAATAAAAGGGTCATGGAAGTTGATAGAAAAAACAGCCAAAAAACATGGAGGATTAGAATTATTAAGGAAAACATTCAGAATATGCAATAATTATATTGGAGTAGATGCTTTGGAAGGTTGGTTACAGACAGCTTGGGTTTATACGGCAATGACAGATTATCCAACACCAACCAATTTTCTAAATCCATTGCCAGCATATCCAGTCAAAAAGATGTGTGAGGCTATTGACAGTTCAAAGAGAGAAAAGGATAGGCTAGGCAAGTTGTATGAGGCTGCAAATATCTATTACAACTATAGTGGCAATGCTAAGTGCTTCAATTTAAATGATCATTCTGATCCTCATGGTCTTGCACAATGGCAATGGCAGGCTTGTACAGAGATGGTAATGCCAATGGCCTCAAACAATGCAAGTATTTTTTCTGAATATGAGTGGTCATTCGAAGACTTTTCTACATCCTGGAAAAATGAGTACGAAATATTGCCAAGACCCAATTGGATTACATCAGAATTTGGTGGTCATGATATTGAGATAGTTTTGAAAAGATCTTCGGGTAACATCATATTTTTTAATGGACTAAGAGACCCTTGGAGTGGTGGAGGAGTGTTGAAGAATATAACAAAATCTATAGTTGCTATAGTTGCAAAAGAAGGAGCTCATCATGTGGATCTAAGGTACTCAACTAAGGAAGATCCAAAGTGGCTTAAAGACATAAGGAAGCAAGAGGTAGAGATCATAGCAAGTTGGATCAAACAATACTATCAAGACATAGCTAAGATATAA 1521 0.3715 MALIFFHYKIFFFSLLSLLSITFTSSHIIPKFPSPLIHPEQQINSASVQNGLYETKFFTQTLDHFNYNPQSYQTFQQRYLINDTYWGGAKKKAPIFVYTGNEGHIDWFTQNTGFMFEKAPYFNALLVFIEHRFYGKSIPFGGKKEVAYANSTTLGFLSSAQALADYATLIIDLKKNLSATESPVVVFGGSYGGMLAAWFRIKYPHVAIGALSSSAPILQFTGLVSPYNFDNIVTQDFKSESENCYKQIKGSWKLIEKTAKKHGGLELLRKTFRICNNYIGVDALEGWLQTAWVYTAMTDYPTPTNFLNPLPAYPVKKMCEAIDSSKREKDRLGKLYEAANIYYNYSGNAKCFNLNDHSDPHGLAQWQWQACTEMVMPMASNNASIFSEYEWSFEDFSTSWKNEYEILPRPNWITSEFGGHDIEIVLKRSSGNIIFFNGLRDPWSGGGVLKNITKSIVAIVAKEGAHHVDLRYSTKEDPKWLKDIRKQEVEIIASWIKQYYQDIAKI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05679 506 Gene3D Serine carboxypeptidase S28, SKS domain 225 390 IPR042269 -
Vivi6g05679 506 Pfam Serine carboxypeptidase S28 60 486 IPR008758 GO:0006508|GO:0008236
Vivi6g05679 506 FunFam Dipeptidyl peptidase 7 225 380 - -
Vivi6g05679 506 SUPERFAMILY alpha/beta-Hydrolases 113 470 IPR029058 -
Vivi6g05679 506 Gene3D alpha/beta hydrolase 57 496 IPR029058 -
Vivi6g05679 506 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 34 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05679 Vivi-Chr6 163139163 163161538 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05679 K01285 - gmx:100781698 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05679 6 163139163 163161538 Vivi6g05679 6 163139163 163161538 ECH