Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05669 ATGGGTAACGCTCAGTCCCCTCCCACTGATCCTCAATTTCTTTCAGCATCCAGAGCTTTCGCTCAAAAGGGGCTTGAAGACTTACGATCACTCTTCAATTCCTTAGCATCTCAATCACAGAGCAATGGAAAATTCATTTCTCCTTCAGTTTTTCAGTCATATTTCAAACTCCATGGCCCTATTGGAGAGAGGATGTTTGATTTGGCTTCTCAGGAGAGGAAGGATCAAAAGTTAACTTTTGAAGACCTTGTAATTACTAAAGCTACTTATGAGAAAGGAACAAAAGATGAAATTGAAGAATTTATATTTCGCTTTTTAGATGTATCTGGGGATAGTTTTGTAGGGAGGTCTGATTTGGAATCTGTTATGAATGCTATCTTTACCGATATATTATGCTTAGAAGGTTCTGAAGTTGGATCAAGCTCACATCAAGATATTGTCAACATATTTCTGAATGCTGCCAATTTCTCCATACATGATGAAAAGTGCACTGAGGAGGCTATGTCTTTTGAAGATTTCAGAAGTTGGTGTTCTCATCTGCCAACTGTGAGGAAGCTTCTTGGAAGCTTGCTTTTGCCTCCTGATTCAGGACGACCGGGTACTCAAGTTCCTAATCTACTGACCCCAAAGGATATTGATTCTAGCACTGTACTTTTGAGAAAGGAGTATGCTTGGCATATAGGAGGAGCACTCTCTCAGCACGAGCTGGAAGATTGGAAGCTTTTGTATCATAGTTCTGTTAATGGTCTTAGTTTCAATACATTCTTGGGCAACATTTCAAACCACAAAGGCCCAACTGTGCTAATTATTAAGGATAAAGATGGTTATATATATGGAGGATATGCTTCTCAACAATGGGAGCGGCATGCTGAATTTTATGGAGACATGAAATGTTACCTTTTTCAACTAAATCCAAAGGCATCTATATATAGGCCGACTGGAGCAAACACTAATCTACAATGGTGTGCTGTCAACTTCAGTTCAGAGGACATTCCAAATGGCATTGGTTTTGGAGGAAAAGTAAATCACTTAGGACTATTTATCTCAGCAAACTTTGACCAAGGACATACATTTTCATGTTCAACATTTGGTAACCCTTGCCTCTCCAAAACTAACCGTATAATACCTGAAACAATAGAATGCTGGGGAGTGACTCAAGGTGTACAAAACAAGAATGATGGTGTTAAGGGAACTGTACTTGAGAGGTTTAAGGAAGACCGGCATATGCTCAATATGGTAGGGCTAGCAAATTCGAGTGAGTAA 1263 0.3951 MGNAQSPPTDPQFLSASRAFAQKGLEDLRSLFNSLASQSQSNGKFISPSVFQSYFKLHGPIGERMFDLASQERKDQKLTFEDLVITKATYEKGTKDEIEEFIFRFLDVSGDSFVGRSDLESVMNAIFTDILCLEGSEVGSSSHQDIVNIFLNAANFSIHDEKCTEEAMSFEDFRSWCSHLPTVRKLLGSLLLPPDSGRPGTQVPNLLTPKDIDSSTVLLRKEYAWHIGGALSQHELEDWKLLYHSSVNGLSFNTFLGNISNHKGPTVLIIKDKDGYIYGGYASQQWERHAEFYGDMKCYLFQLNPKASIYRPTGANTNLQWCAVNFSSEDIPNGIGFGGKVNHLGLFISANFDQGHTFSCSTFGNPCLSKTNRIIPETIECWGVTQGVQNKNDGVKGTVLERFKEDRHMLNMVGLANSSE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05669 420 Pfam TLD 241 384 IPR006571 -
Vivi6g05669 420 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 38 385 - -
Vivi6g05669 420 SMART 109ultra 216 385 IPR006571 -
Vivi6g05669 420 SUPERFAMILY EF-hand 3 190 IPR011992 -
Vivi6g05669 420 Gene3D - 1 189 - -
Vivi6g05669 420 ProSiteProfiles TLDc domain profile. 217 385 IPR006571 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05669 102 419 EF-hand Containing Proteins AT5G06260 62.112 3.38e-149 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05669 - - gmx:100804508 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05669 6 163053514 163062480 Vivi6g05669 6 163053514 163062480 ECH