Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05656 ATGGCTTGCTCAGCTCCTTCTGCTTCTCTCCTATCTCCAAACCCTAACACACTCTTCTCTCCCAAATTCTCTTCTCCGCGTCTCTCTTCTCTCTCCATCCCCAATGCCTCCAATTCACTCCCCAAACTACGCACCTCCCTCCCTCTTTCCATCAACCGCACATCCTCCTCCCGCCGCAGTTTCGCCGTTAGGGCTTCTAGTGAATTACCATTAGTTGGGAACTCAGCGCCGGATTTTGAAGCTGAAGCTGTTTTCGATCAGGAGTTTATCAAGGTCAAACTATCTGAATATATTGGGAAGAAATATGTTATCCTCTTTTTCTACCCATTGGATTTCACATTTGTTTGTCCCACTGAAATCACTGCTTTCAGTGACCGCCATGCAGAGTTTGCAGAACTTAATACCGAGATATTGGGTGTTTCAGTTGACAGTGTGTTCTCGCACCTTGCATGGGTTCAAACAGATAGAAAGTCAGGTGGTCTTGGCGACTTGAACTATCCTTTGATTTCTGATGTCACCAAATCCATATCAAAATCTTATGGTGTTCTCATTCCTGATCAGGGGATAGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATTCAACATTCTACCATCAACAATCTCGGAATTGGAAGAAGTGTTGATGAGACAAAGAGAACTCTCCAGGCTTTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCTGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCCAAGCTTAGCAAAGAGTACTTTTCTGCTGTGTAG 792 0.4533 MACSAPSASLLSPNPNTLFSPKFSSPRLSSLSIPNASNSLPKLRTSLPLSINRTSSSRRSFAVRASSELPLVGNSAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFAELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05656 263 CDD PRX_Typ2cys 72 245 - -
Vivi6g05656 263 MobiDBLite consensus disorder prediction 242 263 - -
Vivi6g05656 263 PANTHER THIOREDOXIN PEROXIDASE 64 262 - -
Vivi6g05656 263 SUPERFAMILY Thioredoxin-like 70 261 IPR036249 -
Vivi6g05656 263 Gene3D Glutaredoxin 64 263 - -
Vivi6g05656 263 FunFam 2-Cys peroxiredoxin BAS1, chloroplastic 64 263 - -
Vivi6g05656 263 Pfam AhpC/TSA family 72 205 IPR000866 GO:0016209|GO:0016491
Vivi6g05656 263 Pfam C-terminal domain of 1-Cys peroxiredoxin 226 261 IPR019479 GO:0051920
Vivi6g05656 263 ProSiteProfiles Thioredoxin domain profile. 70 229 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05656 Vivi-Chr6 162831774 162834403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05656 K03386 - gmx:100786990 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05656 6 162831774 162834403 Vivi6g05656 6 162831774 162834403 ECH