Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05646 ATGTCGGTAAAAGAGTGCAACCACCACAAAGGAAGCAAACACAAACGCATCAGAAAAATCTTCTGGGGAATCGTCATCTTCCTCTTCATCGTCCTCCTCACAATCCTCATCACCTGGGCAATCCTCAAACCATCCAAACCATCTTTCATCCTTCAAGACGTCACCGTCTACGCCTTCAACGCCACCGTCCCAAACTTCCTCACCTCAAATTTCCAAGTCACCGTCTCTTCTCACAACCCAAACAACAAAATTGGCATCTACTACGACCGTCTCGACGCTTTCGTCACTTACCGGAGCCAGCAGATCACCTACAGAACCGCCATACCACCGTCGTACCAGGGCCACAAAGACGTTGACGTTTGGTCGCCGTTTGTCTACGGGACCAACGTCCCGGTAGCTCCTTACAACTCCGCTAGTCTTAGTCAGGATCAGAGTAACGGAAACGTTCTTGTTGTCGTTAAATTTGACGGTAGAGTTAGGTGGAAGGTTGGTGCTTTTATTTCCGGTCATTACCATGTTTTTGTTCGGTGTCCTGCTTTTATTACGTTTGGGCCTCAGAGTAACGGAATCTCCCTCGGTGATAGCGGCGCCGTTAAGTATCAGATTGTTCAACGGTGCACCGTCAGTGTTTAA 633 0.4866 MSVKECNHHKGSKHKRIRKIFWGIVIFLFIVLLTILITWAILKPSKPSFILQDVTVYAFNATVPNFLTSNFQVTVSSHNPNNKIGIYYDRLDAFVTYRSQQITYRTAIPPSYQGHKDVDVWSPFVYGTNVPVAPYNSASLSQDQSNGNVLVVVKFDGRVRWKVGAFISGHYHVFVRCPAFITFGPQSNGISLGDSGAVKYQIVQRCTVSV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05646 210 PANTHER OS05G0367900 PROTEIN 18 197 IPR044839 GO:0098542
Vivi6g05646 210 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05646 Vivi-Chr6 162686268 162687395 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05646 - - gmx:100795832 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05646 6 162686268 162687395 Vivi6g05646 6 162686268 162687395 ECH