Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05642 ATGCAAATGCAACAAACTCAGCAAGCCACCGCGGCAACTATCTCAACCCCCACTCCTCCTCCCTCTTCCCCCGGTCGCCCCACGGCCGAGGCACCGCCGAAGCAAGTCGCTGTCGCAATGGACAAACTCGGAGAAGCCGAAAGAATAATCGCCGACATCAGAATCGGCGCCGATCGCCTCCTTGAAGCTCTTTTCATTTCCGCCGGGCAACCTCACCAAGGCAGTAAGCCGCTTCAAGTGCTCCTCAAGGAAAATGCTTGCATGCAACAGCATTTTCAAGAGCTTCGATCACTAGGAAAGGAGCTTGAAGAAGCTGGAGTTGTTAGTGAATCGGCTCGAACGCGGAAGGATTTTTGGGGTCTGCATATGCCACTGGTTTGCCCAGATGGTGCAGTTGTAGCTTATGCGTGGAAACGGCAACTCGCTGGTCAAGCTGGTGCTTCTGCAGTTGATAGGACAAGGTTAGCTCTCAAAGCTTTTACTGATCAGAAAAAGCGATTTTTCCCCCATCTTGATGATGGAATTGAAACTAATGAATCAGCTTCAAAGAAACAATGTGGATCTGAAGAAGTTTCATTTGAACCTAAGGAAGACATGAGTTTTCTGAGGTTGCTACCAGATGTTCTGAAGTCCGTGGAAAAGGAAGTGCCAAATGTGAAAATTTCGACTTTTGAACGATTGGACTGGTTAAAAAGAGCTTCCACACTAGCCTCTGCAACTAATGAGAGTTCTCAAGAACATAACTATCATGGTTCTAATAAGCCAAGACTAGGATCAATTGGAATAGTTGATTCAGAGAAGGTTGCGGTGATAGAATTGCTGTCTCCATCTATCTTCAGAGCTGTTATATCCTTGCATCCTGCTGGGTCCGCCACTGCTGATGCTGTAGCTTTCTTTTCTCCTGACGAGAATGGAAGCTATGTGCATGCAAGGGGGATTTCAACTCATCATGTGTATAGACATATTACGGAGTATGCAACAATAGCTCTGCAGTATTTTCTTGGCAACCAAGCTGAAACATCACTGTATTCTCTATTGCACTGGATTTGTAGCTACCAGACCATATTTTCAAGACCATGCAGAAAATGTTCAAAGCTACTTGCCATGGATGAACAATCAAATTTGTTGTTACCTCCAGTTCACCGGCCCTACTGGAAGTTTTCCCTTTCAAAAATTTTGTCAACCATATCTTCAAAGGACCAGCATTCAGATACTACTATGGCCTATCATATTGGCTGCCTATCCGGTGAAGTATGA 1257 0.4543 MQMQQTQQATAATISTPTPPPSSPGRPTAEAPPKQVAVAMDKLGEAERIIADIRIGADRLLEALFISAGQPHQGSKPLQVLLKENACMQQHFQELRSLGKELEEAGVVSESARTRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDGIETNESASKKQCGSEEVSFEPKEDMSFLRLLPDVLKSVEKEVPNVKISTFERLDWLKRASTLASATNESSQEHNYHGSNKPRLGSIGIVDSEKVAVIELLSPSIFRAVISLHPAGSATADAVAFFSPDENGSYVHARGISTHHVYRHITEYATIALQYFLGNQAETSLYSLLHWICSYQTIFSRPCRKCSKLLAMDEQSNLLLPPVHRPYWKFSLSKILSTISSKDQHSDTTMAYHIGCLSGEV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05642 418 Pfam Mediator complex subunit 27 299 413 IPR021627 GO:0016592
Vivi6g05642 418 PANTHER 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED 3 415 IPR021627 GO:0016592
Vivi6g05642 418 MobiDBLite consensus disorder prediction 171 191 - -
Vivi6g05642 418 MobiDBLite consensus disorder prediction 1 33 - -
Vivi6g05642 418 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05642 Vivi-Chr6 162589416 162595702 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05642 K15170 - gmx:100782776 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05642 6 162589416 162595702 Vivi6g05642 6 162589416 162595702 ECH