Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05638 ATGGCTACCCAGCATCAACCTTCAAGCGCGTTCTCCTTCCTCTCAAAAGGCTGGCGCGAAGTCCGTGACTCAGCTGACGCGGATCTCCGTCTAATGAAAGACCGAGCCAACTCGTTCAAAAACCTAGCCACCTCATTCGACCGGGAGCTTGAGAATTTCTTCAATTCCGCTGCGCCGGGGTTCTCCGTCGCGGCGATGCGTTCTTCTCCTCCCGCTGAGATTGAATTCGTGAAGAGACTGCAGCCGAAGTTGTCGGAGATTCGTAGGGCGTACTCGTCGCCGGATTTTAGTAAGAAGGTTCTGGAGAAGTGGAAGCCGAGGGCGAAGATTCGGATTGATTTGTCGGCTATTAGGAATGCGATTGTGGAGGAGGAGATTGGGGATGGGGTTGTGGATTTTGAGAGAATTAAGGGGAGAAGGTTAGGGTTTTGGGAAGGGTTGAAAGGGGAGAGTGAGAGTGAGAGTGAAAGTAGGGATTGGGAACCGATTCGAGCTTTGAAAACTAGGATTAGGGAGTTTGAGAAGAAGAGTTCTTCTGTGGAAATTTTTGATGGGTTTAAGAATAGTGAATTTCTTGAGAAACTTAAGTCTAGCTTGAAATCGATGTGCAAAGAACCCCAAGAATCAAAGGAAGTGCCACCACTGGATGTACCTGAACTTCTGGCCTACTTTGTTAAACAGTCTGGGCCATTTTTGGATCAACTTGGAGTCAGCAGAGATACGTGCGACAAGATAGTTGAAAGCCTGTATAGCAAACGCAAGAACCAACTTCTACTGCAGTCTGATTCTGAGGAAGAATCTTCTTTGCTTGGGAATGGAAACATAAATGATGAATTGGATCTGCGAATAGCCAGTGTCCTTCAGAGCACAGGACACCGGTATGAAGGTGGACTCTGGACAGACCGTCCAAAGCAGGATTTCTCTAGCAATGAAAGACATGTTGCAATAGTCACAACTGCTAGTCTTCCTTGGATGACGGGAACAGCTGTAAACCCACTATTTCGAGCTGCATATTTATCACAGTCTAAAAAGCAGAAAGTTACTCTGCTGGTTCCATGGCTTTGTAAATCGGACCAGGAACTAGTTTATCCCAGCAACCTCACTTTTGCTTCCCCAGAAGAGCAGGAAGGTTATATACGCAACTGGCTTGAAGAAAGAACTGGTTTTAAGGCAGAGTTCAAAATTTCATTTTATCCCGGGAAGTTTTCAAAGGAAAGGCGTAGTATATTACCCGCTGGAGATACTTCTCAATTTATACCATCCAAGGATGCTGACATTGCTATCCTGGAAGAACCAGAACATTTGAATTGGTATCATCATGGAAAGCGTTGGACAGATAAATTCAACCATGTTGTTGGCGTTGTCCATACCAATTACTTAGAATACATAAAGAGGGAGAAAAATGGGGCACTTCAGGCATTCTTTGTGAAACACATCAACAACTGGGTTACAAGAGCTTACTGTAGCAAGGTTCTTCGTCTCTCGGCTGCTACTCAGGATTTACCCAACTCTGTAATTTGCAATGTTCATGGTGTGAATCCCAAGTTCTTAAAAATTGGAGAAATGATGGCTGCAGAGAGAGAGCTAGGGCAGAAGGCTTTCACAAAAGGGGCATATTTCTTGGGAAAGATGGTATGGGCAAAAGGATATAAGGAGTTGATAGATTTATTAGGAAAGCATAAGACTGACCTTGATGGCTTCAACATGGATGTATTTGGAAGTGGAGAGGATGCTCATGAAGTCCAGAGTGCAGCTAGAAGGTTGGATTTGAATCTCAACTTTCAGAAAGGAAGAGATCACGCAGATGATTCCCTTCATAGGTACAAAGTCTTTATAAATCCTAGCATCAGTGATGTGCTATGCACAGCTACGGCCGAGGCACTTGCCATGGGAAAATTTGTAGTGTGTGCTGATCATCCATCAAATGAGTTCTTCAATTCATTTCCCAATTGTTTGATTTACAAGACACCAGAAGACTTTGTAGCAAAAGTAAAAGAAGCATTAGAAAATGAGCCTTATCCTCTCACACCTGAACAAAGATATAAACTTTCTTGGGAAGCTGCAACTCAAAGATTTATGGAATATTCCGATCTTGACCAAATCCTAAACATGGAAAAGGATGGCGTAAAACCAAGTAGAGATAAAGGAAAGCTCATTGGCAAGTCTGCATCAATGCCTAATCTTTCAGAACTTGCAAATGGAGGCTTAGCATTCGCTCACTACTGTCTCACTGGGAACGAGTTCCTGAGATTATGTACTGGAGCAACACCTGGGACACGTGATTATGACAAGCAACACTGTAAAGACCTTAATCTCTTGCCCCCACAGGTGGAGAATCCTATCTATGGCTGGTAA 2355 0.4391 MATQHQPSSAFSFLSKGWREVRDSADADLRLMKDRANSFKNLATSFDRELENFFNSAAPGFSVAAMRSSPPAEIEFVKRLQPKLSEIRRAYSSPDFSKKVLEKWKPRAKIRIDLSAIRNAIVEEEIGDGVVDFERIKGRRLGFWEGLKGESESESESRDWEPIRALKTRIREFEKKSSSVEIFDGFKNSEFLEKLKSSLKSMCKEPQESKEVPPLDVPELLAYFVKQSGPFLDQLGVSRDTCDKIVESLYSKRKNQLLLQSDSEEESSLLGNGNINDELDLRIASVLQSTGHRYEGGLWTDRPKQDFSSNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSKKQKVTLLVPWLCKSDQELVYPSNLTFASPEEQEGYIRNWLEERTGFKAEFKISFYPGKFSKERRSILPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCSKVLRLSAATQDLPNSVICNVHGVNPKFLKIGEMMAAERELGQKAFTKGAYFLGKMVWAKGYKELIDLLGKHKTDLDGFNMDVFGSGEDAHEVQSAARRLDLNLNFQKGRDHADDSLHRYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFNSFPNCLIYKTPEDFVAKVKEALENEPYPLTPEQRYKLSWEAATQRFMEYSDLDQILNMEKDGVKPSRDKGKLIGKSASMPNLSELANGGLAFAHYCLTGNEFLRLCTGATPGTRDYDKQHCKDLNLLPPQVENPIYGW 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05638 784 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 1 782 IPR044525 GO:0046481
Vivi6g05638 784 Pfam Glycosyl transferases group 1 539 674 IPR001296 GO:0016757
Vivi6g05638 784 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 512 670 - -
Vivi6g05638 784 Gene3D Glycogen Phosphorylase B; 536 690 - -
Vivi6g05638 784 CDD Glycosyltransferase_GTB-type 443 654 - -
Vivi6g05638 784 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 314 694 - -
Vivi6g05638 784 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 401 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05638 Vivi-Chr6 162522098 162527752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05638 9 607 Glycosyltransferase AT3G11670 70.000 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05638 K09480 - gmx:100796354 1347.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05638 6 162522098 162527752 Vivi6g05638 6 162522098 162527752 ECH