Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05637 ATGGATATTAAGTCAACAAATCAAGTTAACAAAGCTGGAATATTATCTAGAATGGGTGGTTTCTTCAATGCTTTGGCTTTGAAGTTTAAGTCCAAGTTAATGAATGCAACAAAAAGTGTGAAAAAGATTGGAAAAGATGACCCTAGAAGAGTAATCCACTCATTGAAAGTTGGAGTTGCTCTTACAGTTGTGTCATTGTTTTACTATTCAAGGCCTCTTTATAATGGCTTTGGAGTTGCTGGAATGTGGGCTGTTCTTACTGTCGTTGTAGTTTTCGAATTTACTGTTGGTGCAACCCTTAGCAAAAGTTTGAATAGAGGATGTGCTACATTAGTAGCAGGTGCTTTAGGGGTTGGAGGGCATCACTTGGCCACTGCTGTTGGAGAAAAAGGAGAAGCTATTGTCCTTGGTGCCCTTGTCTTCATTCTAGCTGCAATTGCAACATTTTTAAGATTTGTTCCAAAGATCAAGGCAAGATATGATTATGGGATGGTGATATTTATATTGACATTCTGTTTGGTTAGCGTGTCGGGGTATAGAGTGGAGGAACTTGTTGAGCTTGCACATCAGAGACTTTCAACAATTATAATTGGAGCTGCAGCTTGCATGCTTATCTCCATATTTGTATGTCCAGTTTGGGCAGGTCTAGACCTTCATAACTTGGTTGCTTCCAACATAGAAAAACTAGCAAATTACCTTGAAGGTTTTGAAGGTGAATATTTTCACTCATCAGAAGATAAAGAAAAATCTAAGTCACTTCTACAAGGATATAAAAGTGTTCTCAACTCCAAAGCAATTGAAGAATCTTTGGCAAATTTTGCAAGGTGGGAACCAGGTCATGGCGGTTTCAGTCTTCGTCATCCTTGGATGCAATACTTGAAAATCGGAGTACTTGCTCGCGAATGCGCATACAAGATTGAAACCCTCAACACATATCTTAACCCTGAAATCCAAACTTGTTTGGAATTCAAGTGCAAAATTCAAGAAGAATGCACAAAGATGAGTTCAGAATCCAACAAAGCATTGAAAGCAATATCATCATCAATGAAAACAATGACACACCCATCATCAGCTAAAAGCCACATAGAAAATTCAAAAATCGCAATTGAGGAACTCAAAGTTGTACTAGAAGACATTTCCTTAGAGGATGTAGAGCTCTTAGCTATAATACCAGTTGCCACAGTTGCTGCAATACTTGAAGAAATCACTATTTCAGTTGAGAAAATCTATGATTCAGTTTCTGAGCTTTCTCATTTGGCACACTTCAAGAATGTAGAATCCAATGTCTCACCAGAAAAGCCACCACTACTTCATAGAGGAATCATAAAACCTGTCGAGGACATTGATAACGCGCCACATGTTGCAATCGTGATCCAAGATTTATGTACAGACTCTCCGAAAAAAGCTAGAAAAGAAACCACTGAAATCCTTCAAACAATAACTATAAATTAA 1452 0.3795 MDIKSTNQVNKAGILSRMGGFFNALALKFKSKLMNATKSVKKIGKDDPRRVIHSLKVGVALTVVSLFYYSRPLYNGFGVAGMWAVLTVVVVFEFTVGATLSKSLNRGCATLVAGALGVGGHHLATAVGEKGEAIVLGALVFILAAIATFLRFVPKIKARYDYGMVIFILTFCLVSVSGYRVEELVELAHQRLSTIIIGAAACMLISIFVCPVWAGLDLHNLVASNIEKLANYLEGFEGEYFHSSEDKEKSKSLLQGYKSVLNSKAIEESLANFARWEPGHGGFSLRHPWMQYLKIGVLARECAYKIETLNTYLNPEIQTCLEFKCKIQEECTKMSSESNKALKAISSSMKTMTHPSSAKSHIENSKIAIEELKVVLEDISLEDVELLAIIPVATVAAILEEITISVEKIYDSVSELSHLAHFKNVESNVSPEKPPLLHRGIIKPVEDIDNAPHVAIVIQDLCTDSPKKARKETTEILQTITIN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05637 483 Coils Coil 362 382 - -
Vivi6g05637 483 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 29 428 - -
Vivi6g05637 483 Pfam Aluminium activated malate transporter 42 417 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05637 Vivi-Chr6 162505746 162508210 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05637 1 460 Miscellaneous Gene Families AT3G11680 55.839 1.02e-168 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05637 K25841 - gmx:100170704 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05637 6 162505746 162508210 Vivi6g05637 6 162505746 162508210 ECH