Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05575 ATGGATTCTGAGAATGAGGTTGCTCTGGAGGAAGAGAAACGTGTAATTGGTGTGATGGATAAGAAGGATGTAAATAAAGAAGATGCAAACGTTTGTGGTGAAGAAATTCAAAATGAGAATGAAGCATCTAAGGTTGAAAGCCATGTTTCTAGTAATGACACCGTTGAATCTGAAGCATCAAAACATGCTAAGGAAACAAAGAGTAGAGAAAGTGTTGCTTCCAAGAACAACAAAGTTGGCAAAGATAAGTCCAATTTGAAGGGACCAACTTCAACATCTAGAAAACAAAGGCCAAGCCTTTCTCAGAGTTTTTCCTTCCCAGCCAAATCAAATCGAGAAGATTCTATGCAGAAAAGCATTGATGGTTCTCTTGTTAAGACCAAAGCTAAAAATGTGAAATCCTCCAATCTTCATCATTCAAGCAAGTCGACAAACTCTGAAGGGAAATCAAATGAGGCAAAAACAAACACTGAAGGTTGTAATAAGAGGACTACTTTGTCATCCATAAATGGTTCGAAAAATTCTGTGTTTGGAAGGTCTACTTCACTTGGGGGAGTCAACAAGAGTCACACTTCTGAGGCATCCATAAGTGCTACTCATCCTCAGAGAAACATAAGTTCAGGATTTTCATCTAGATTGGAAGTAAGAGCTGAAAAGAGAAAGGAGTTTTTCTCCAAGTTGGAAGAAAAAGTTCAAGCCAAGGAAGCAGAAAAATCCAATCAACAAGTCAAATCAAAGGAAAACCAAGAGGCAGAGATCAGGCAATTGAGAAAGAGTTTGAGTTTCAAAGCCACTCCAATGCCAAGTTTCTATAAGGAACCACCTCCAAAACTTGAGCTAAAAAAGATACCAACAACCCGGCCAAGATCTCCAAAGCTTGGAAGGAACAAAGAGTCTTCTTATTCAAGTCCACGTGGGAATCAGCAGCATAATGATTCAGACAAGGCAAATATCATAAAGGGTCATAAAGATGTGATTTCAAAGAAACCAATCATGAAAACTCAAGATAAAATGAAGAGTGAAGAAAATGAAACCAAAGCAAGCAATGAAGAATGCACAAATAACTTGGAGCAACAGTTTGAGACAGATCATTCTGCAAATGATCATGCACTGTCTTTAAATTTTACTACACCTGAGATTGTATCACACGAGGCTACTGTTGGAGTGTAG 1170 0.3829 MDSENEVALEEEKRVIGVMDKKDVNKEDANVCGEEIQNENEASKVESHVSSNDTVESEASKHAKETKSRESVASKNNKVGKDKSNLKGPTSTSRKQRPSLSQSFSFPAKSNREDSMQKSIDGSLVKTKAKNVKSSNLHHSSKSTNSEGKSNEAKTNTEGCNKRTTLSSINGSKNSVFGRSTSLGGVNKSHTSEASISATHPQRNISSGFSSRLEVRAEKRKEFFSKLEEKVQAKEAEKSNQQVKSKENQEAEIRQLRKSLSFKATPMPSFYKEPPPKLELKKIPTTRPRSPKLGRNKESSYSSPRGNQQHNDSDKANIIKGHKDVISKKPIMKTQDKMKSEENETKASNEECTNNLEQQFETDHSANDHALSLNFTTPEIVSHEATVGV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05575 389 MobiDBLite consensus disorder prediction 83 211 - -
Vivi6g05575 389 MobiDBLite consensus disorder prediction 35 211 - -
Vivi6g05575 389 Coils Coil 224 256 - -
Vivi6g05575 389 MobiDBLite consensus disorder prediction 230 350 - -
Vivi6g05575 389 MobiDBLite consensus disorder prediction 315 348 - -
Vivi6g05575 389 Coils Coil 331 351 - -
Vivi6g05575 389 PANTHER PROTEIN WVD2-LIKE 3 12 360 IPR044806 GO:0000226|GO:0008017
Vivi6g05575 389 MobiDBLite consensus disorder prediction 230 257 - -
Vivi6g05575 389 MobiDBLite consensus disorder prediction 55 82 - -
Vivi6g05575 389 Pfam Targeting protein for Xklp2 (TPX2) domain 212 277 IPR027329 -
Vivi6g05575 389 MobiDBLite consensus disorder prediction 295 314 - -
Vivi6g05575 389 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05575 Vivi-Chr6 161507043 161509662 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05575 - - psat:127125509 608.216