Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05553 ATGGCTAAAACAAATAAGAAGCGCACAGGAAAATCTCCTGGTAAAAGAAATGATACTTCACATTGCCTTGTGGATCCTCCGGCCTGTGATAATCGGAATGAGGATGATGATTGGGTTATAGTTAAAAAGCAGAGAGTCATCATTATGGTTCCGGCTGCACCTCTTAGCGAAAGATCCTCAACAGAAAACGAAGAGCCGAATCACATGCACCCTATGCCTCCTGTAACGTCAAGTAACCAGGAGGAACTTCCCACGGAGACTGGTAATGAAAATCCTTCTTGTAATGAACAAGAGAAGACTGTTTCATTGGCTGGCCAAGCAGAGATTCATACTGTGACAAAAGCTCTTCCTCCCTTAATACCTAAATCACCTTCAGCCAATTCACCACGGGTAGATCAAAGAGTAGAGTCAGAAAATCCACACCAAGTCAGTAGTTTGAAGTCCCACAAATTAGTTGGATTATCTAATACATCAAAGGCTATCAAGCAGCCCAGAACATTACCCGCACCAAGAAGTTCCTCCAACTTGGCCACTTTGAATCGAGGTTTGAGAGCATCAAATCTCGAGAGAAAGCTCGGAAGAGCTGGTGGGTTGAACGAGTGGCTGACATCACTTGGACTGGATCAGTTTGTGAGAATGTTTCAGGGGAAGATTATCAGTAAGTATCAGCTTGTGAATCTAACCATGAAAAAACTGAAGGATATGGGTGCCAATGCAGTGGGACCTCGCAGGAAGCTGATCCACGCCATGGACTGTGTTTGCCAGCCATATTGCTTTGAGGCGTTATAG 789 0.4449 MAKTNKKRTGKSPGKRNDTSHCLVDPPACDNRNEDDDWVIVKKQRVIIMVPAAPLSERSSTENEEPNHMHPMPPVTSSNQEELPTETGNENPSCNEQEKTVSLAGQAEIHTVTKALPPLIPKSPSANSPRVDQRVESENPHQVSSLKSHKLVGLSNTSKAIKQPRTLPAPRSSSNLATLNRGLRASNLERKLGRAGGLNEWLTSLGLDQFVRMFQGKIISKYQLVNLTMKKLKDMGANAVGPRRKLIHAMDCVCQPYCFEAL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05553 262 MobiDBLite consensus disorder prediction 72 96 - -
Vivi6g05553 262 ProSiteProfiles SAM domain profile. 198 256 IPR001660 GO:0005515
Vivi6g05553 262 Gene3D - 189 255 IPR013761 -
Vivi6g05553 262 CDD SAM_superfamily 198 249 - -
Vivi6g05553 262 PANTHER SCP160 113 260 - -
Vivi6g05553 262 MobiDBLite consensus disorder prediction 126 148 - -
Vivi6g05553 262 MobiDBLite consensus disorder prediction 1 34 - -
Vivi6g05553 262 SMART SAM_4 190 256 IPR001660 GO:0005515
Vivi6g05553 262 Pfam SAM domain (Sterile alpha motif) 198 252 IPR001660 GO:0005515
Vivi6g05553 262 MobiDBLite consensus disorder prediction 53 96 - -
Vivi6g05553 262 MobiDBLite consensus disorder prediction 114 148 - -
Vivi6g05553 262 SUPERFAMILY SAM/Pointed domain 196 255 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05553 Vivi-Chr6 161219749 161223073 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05553 - - psat:127125488 474.552