Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05551 ATGGACTACGATCCTAAAAGTAGCGAAACCCCTTTGTTATCTTCCAAAAAAACTTCAAAGCTTCAAACTTTAGGGAATATCATTGTCACTGTTGTGGGAACTGGTGTTTTGGGTTTGCCCTTTGCTTTTCGGGTTGCTGGTTGGGTTGCTGGGTCGCTTGGTGTTGCTATCGTGGGAATTTCAACCTACTACTGCATGCTCCTTCTTGTTAAGTGCAGAGATAAGTTGGCAATAGAAGAGCCATTAGCGGAGTCAAGATCATATGGAGACCTGGGTTATAGATGCTTTGGAACCTCGGGTCGGTATCTGACTGAAGTTGTGCTTGTGGTAGCACAATGTGCAGGGTCGATTGCGTATTTGATATTTATTGGGCAAAACCTTGATTCTGTATTTCAAAGAAATGGACTCTCGATTACCGCTTACATATTTATGCTAGTACCAATTGAAATTGGATTGTCATGGATAGGGAGCTTATCATCTTTAGCACCATTTAGCATTTTTGCCGACGTGTGCAATATCCTAGCTATGGGAATTGTAATGAAGGAAGATGTACGACAGGCCATAGAAGGTGGATTACCATTTGGGGAAAGGACGGCAATCACATCGAACATTGGGGGATTACCATTTGCAGCAGGCATGGCTGTTTTCTGTTTTGAGGGATTTGGAATGACACTTGCCCTAGAGAATTCGATGAAGGATAAATCTAAATTCCCAAAATTGCTGGCTCAGACTTTTAGTGGGATAACACTTGTATACATTCTTTTTGGGTTATGTGGTTACATGGCTTTTGGTGAAGAAACTAAAGATATTGTGACCCTTAATCTCCCTAGAAATTGGTCATCGCTTACTGTACAGGTAGGATTATGCCTGGGGCTTATGTTCACATTCCCAATCATGTTACATCCAATAAATGAAATTATGGAAGGAAAACTCAGAATCATCCACAGAAACAACAACAATGACTCAACAGAACCAGGAAAAACTACAATATACACCAGTCGGGCTATTGTGGTGGTTGTTTTGGCTGTCATTGCTTCATTTGTGCCAGAATTTGGAGTATTCGCCTCATTTACGGGAAGTACCCTATGTGCTTCGCTCTCATTTATTTTGCCAGCCACATTTCACCTAAAATTATTTGGCTCTTCTCTCCGCATCTGGCAAATAGTCCTAGATTTCATTGTATTAATCAGTGGAATATTTTTCGCTGTTTATGGAACTTACAATACAATTGTTGGAGTTGGAGCTTGA 1248 0.4087 MDYDPKSSETPLLSSKKTSKLQTLGNIIVTVVGTGVLGLPFAFRVAGWVAGSLGVAIVGISTYYCMLLLVKCRDKLAIEEPLAESRSYGDLGYRCFGTSGRYLTEVVLVVAQCAGSIAYLIFIGQNLDSVFQRNGLSITAYIFMLVPIEIGLSWIGSLSSLAPFSIFADVCNILAMGIVMKEDVRQAIEGGLPFGERTAITSNIGGLPFAAGMAVFCFEGFGMTLALENSMKDKSKFPKLLAQTFSGITLVYILFGLCGYMAFGEETKDIVTLNLPRNWSSLTVQVGLCLGLMFTFPIMLHPINEIMEGKLRIIHRNNNNDSTEPGKTTIYTSRAIVVVVLAVIASFVPEFGVFASFTGSTLCASLSFILPATFHLKLFGSSLRIWQIVLDFIVLISGIFFAVYGTYNTIVGVGA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05551 415 Pfam Transmembrane amino acid transporter protein 17 410 IPR013057 -
Vivi6g05551 415 PANTHER AMINO ACID TRANSPORTER 14 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05551 Vivi-Chr6 161209384 161212157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05551 6 413 Organic Solute Cotransporters AT3G11900 62.802 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05551 K14209 - gmx:100305659 634.409