Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05519 ATGGCGGTTTCCGAAGAAGAATGCTCTTCCGTCAAGTCAGCTTCTCCTTCTTCTTCATCCTATTCTCCTTCATCCCCTCCCCCGCGCTATTATCTCTCCAAGTGCGTACTCAGAGGAAGCGCGGTTCTCCAAGTTCTCTACGCTAATCTTCGTTCACCGTCCTCCAACGACGTCGTTTTCGGCAAGGAGACATCTATAGAGTTGGTGGTGATTGATGAGGATGGGAATGTACAAACTGTCTGTGATCAGCCTGTTTTTGGCATCATTAAAGATCTTGCTGTATTGCCGTGGAATGAGAAATTCCGTGCTCGTCGCCCACCACAGACTCAAGGTAAAGACCTCTTGGTTGCGTTATCTGATTCCGGAAAGCTGTCGTTGCTCACATTTTGCAATGAAATGAACAGATTTTTTCCTATTACACATGTTCAACTATCTGATCCCGGTCACATGAGGGATATTCCAGGAAGAATGTTGGCAATTGATTCAAGTGGTTGCTTTATTGCTGCTAGTGCATATGAAGATAGGTTGGCTCTGTTCTCAATGTCCACGTCAATGACCGGGAGTGATATCATTGATGAGAGAATAATATATCCCTCTGAAAGTGAAAGGACTGCAATTTCTTCCAGAACCATCCAGAAAACCAGTATAAGCGGTACTATTTGGAGTATGTGCTTTATTTCATTGGATATCCGACAACCAAGCAATGAGCATAATCCTGTATTAGCTATTATTCTAAATAGGAAGGGGGCTGCTCTAAATGAATTGCTTTTATTGGAATGGAATGTTAAATCACATACAATCTCTGTTATTTCTCAATATGTTGATGCCGGACCTCTAGCTCATAACATTGTTGAAGTTCCCAACTCTTTGGGACTTGCATTTCTATTCCGGGCCGGTGATGTTCTGCTAATGGATTTTAGAGATCCTCACAATCCATTATGTGTCTACAAGACTTGCTTGAACATTTTACCCTTTGCAATGGAAGAGCAGACTTATATGGACGACTCTTGTAAATTGCACGATCTTGATGACGAAGGCTTTAGTGTTGCCGCCTGTGCTTTGTTGCAGCTAAGCGATTTTGATCCTATGTGCATTGACAGTGACAGTGGCAATACTAATTCTGGTCTCAAGTTCATATGCTCTTGGAGTTGGGAACCTGAGAATCATAAAGTTCCTAGGATGATCTTTTGTGTAGACACTGGAGAGTTTTTTATGATAGAAGTTTTTTTGGACTCTGATGGTCCTAAATTCAGTCTCTCCGAGTGTCTCTATAAAGGTCTACCTTGTAAAGAACTTTTGTGGGTTAAGGGTGGTTATCTAGCATCAATGGTAGAAATGGGGGACAGCGTGGTCCTGAAATTGAGAGATGGAAGACTATCCTTTACAAATCTTATTCAAAACATTTCACCAATCTTCGATGTGGCAGCTGGGGATTATCATGATGAGAAGCATGAGCAAATGTTTGCTTGCTGTGGTGTGACACCTGAGGGGTCATTAAGGATTATTCAAAGTGGTATCAATGTAGAAAAGCTACTCAGAACCCCTTCTACTTATGAAGGGGTAGCTGGTACTTGGACTGTTCGAATGAAAATTACGGATTCGTATCATTCTTTTCTAGTTCTATCATTTCTTGGGGAGACCAGAATATTGTCAGTTGGCTTAAGTTTTACTGATGTGACTGATTCTGTTGGTTTCCAACCTAATGTCTGTACTTTGGCGTGTGGCCTTGTAAGTGATGGTTTGCTTGTTCAGATTTACCAATCTACTGTTAAGCTTTGTTTGCCTACTAAGGATGGTCATTCTGAAGGCATCCCTTTGTCTTCTCCTATTTGCACATCTTGGTCCCCAGACAATCTGAATATTAGTCTGGGAGCAGTTGGGCATAATTTCATAGTTGTGTCAACTTCTAACCCATGTTTTTTGTTTATCCTTGGGGTTAGAGTGCTATCAGGTTATCAATATGAAATTTATGAAATGCAACATTTGGAACTGCAGAACGAATTATCATGTATTTCCATTCCTAGACCTATGTATGGAAAAAAACAATCAAATTCATCCATTTCAGAAATTAATAGCTCAATTGCTTCTTTTGTAAGCGGAGTGGACATCAATAAAACATTTGTTATTGGCACTCATAGGCCTTCTGTGGAAATTTGGTCTTTTGATCCGAATGGTGGAGTCATGGTAGTTGCTTGTGGTACAATTTCATTAAAAAGTACAATGGGGACTGCTAAAAGTTTTTGCATACCTCAAGATGTACGACTCGTATTTGTTGATAAGTATTATGTTCTTGCTGGATTGAGGAATGGAATGCTCCTCCGCTTTGAGTGGCCAACAGAATCGTCTCACTCTTCATCAATAAACGTGGACACTGCTTTATCTTCTATAAATTTGGTAAATTCTATGGCCGAGGCTTTCAACGTGAGAAATAACCTTCCTTGCATGCTTCAATTGATTGCCATTCGTCGCATTGGCATTACTCCAGTTTTCTTGGTGCCCCTGGATGACACACTTGATGCTGATATAATTGCACTGAGTGATAGAGCTTGGTTGTTGCATAGTGCAAGACACAGCATTTCCTATACTTCTATCTCATTTCAACCATCTTCACATGTAACTCCTGTTTGCTCTATTGACTGTCCAAAAGGAATATTATTTGTTGCTGAAAACAGTTTGCATCTGGTGGAGATGGTCCACAGCAAGAGACTTAATATGAGGAAGTTTCATTTAGCGGGCACTCCACGGAAAGTCTTGTATCACAACGAAAGTCGGATGTTACTTGTGATGAGGACTGAACTGAGTATTGGTGCATGTTTGTCTGACATATGTTGTGTGGATCCCCTAAGTGGGTCAGTAGTATCTTCTTTTCGAATGAAACAAGGAGAAACAGCAACTTCCATGGCATTAATTAGGTTTAGAAATGAGCAGGTGCTTGTGGTTGGAACTAGTCTGTATTCTGGTCCACCCGTAATCTCCAGTGGTGAAGCTGAGAATGCTAAGGGTCGTCTTCTTGTTCTCAGCCTTGTTCATGTGCAAAATTCAGATAGTGGTTCAATGACCTTCTGTTCGAAGGCGGGGTCGTCATCTCAAAAAACGTCACCTTTCAATGAAACTGTTGGGCATGTTCCTGAACAGCTATCAAGCAGTAGCCTTGGCAGCAGCACTGATGATAATAGTTCTGACTGCACCAAACTTGATGAAAATGAAATGTGGCAGTTCCGATCAGATTATTCAACTACATGGCATGGAGTAGTACAAGCCATCTGTCCTTATCTTGATCGCTATTTTTTGGCATCTGCCGGCAATACTTTTTATGTTTGTGGTTTCCCAAATGACACTCCGGAAAGAGTGAAAAGGTATGCTGCAGGAAAGACGCGTTTCATGATAAAATCTTTGACTGCATGTTTTAGAAGAATAGCAGTTGGTGATTCTCGTGATGGTATCCTTTTCTATTCTTACCATGAGGAAGCAAAAAAATTGGAGCAACTTTACGGTGACCCATCATTTAGGTTGGTTGCTAATTGCCTTCTCATGGATGATAACACGGCTATTGTTTCGGATCGTAAAGGAAGCATAGCTGTTTTATGTTCAGATCATTTAGAAGCACCAAATAATGTAAGATCGGAATGCAATTTGAGAATAAGCTGTGCTTATTTCATGGCGGAGATAGCTGTGAGCATCCAAAAGAGCTCATATTCATACAGACTTCCAGCTGATGATGTATTGTCAGGTGGCATTGGTTTTGGCCCCAAGACAAATGTTGACCCACTACAAAATACTATTCTTGCTTGTACTCTGTTAGGAAGCATAATGATTTTCATCCCTTTATCAAGAAATAACATCGTTTGGGTTTTCAACTCAGTTTGGTTTTTCTTCTTTGATAGGTTAAGAGAGGAATATGAGCTCTTAGAGGCTGTGCAGGCAAGGCTTGTTGTCCATCATTTGACTGCACCTGTTCTTGGAAATGATCATGATGAGTTTCGGAGCCGTGAAAATCCAGATGGAGTACCCAAGATACTTGATGGAGACATGTTGACTCAGTTTCTGGAGCTTACAAATATGCAGCAAAATAGCATTTTATCTTTGGAACCACCTGATGATATGCTAAAACCAAGTTCAAAGCCACTCCTTTCCCAATTTTCTGTCAATCAGGTCATTCAACTTCTAGAGCGAGTTCATTATGCGTTGAACTAA 4194 0.408 MAVSEEECSSVKSASPSSSSYSPSSPPPRYYLSKCVLRGSAVLQVLYANLRSPSSNDVVFGKETSIELVVIDEDGNVQTVCDQPVFGIIKDLAVLPWNEKFRARRPPQTQGKDLLVALSDSGKLSLLTFCNEMNRFFPITHVQLSDPGHMRDIPGRMLAIDSSGCFIAASAYEDRLALFSMSTSMTGSDIIDERIIYPSESERTAISSRTIQKTSISGTIWSMCFISLDIRQPSNEHNPVLAIILNRKGAALNELLLLEWNVKSHTISVISQYVDAGPLAHNIVEVPNSLGLAFLFRAGDVLLMDFRDPHNPLCVYKTCLNILPFAMEEQTYMDDSCKLHDLDDEGFSVAACALLQLSDFDPMCIDSDSGNTNSGLKFICSWSWEPENHKVPRMIFCVDTGEFFMIEVFLDSDGPKFSLSECLYKGLPCKELLWVKGGYLASMVEMGDSVVLKLRDGRLSFTNLIQNISPIFDVAAGDYHDEKHEQMFACCGVTPEGSLRIIQSGINVEKLLRTPSTYEGVAGTWTVRMKITDSYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSTVKLCLPTKDGHSEGIPLSSPICTSWSPDNLNISLGAVGHNFIVVSTSNPCFLFILGVRVLSGYQYEIYEMQHLELQNELSCISIPRPMYGKKQSNSSISEINSSIASFVSGVDINKTFVIGTHRPSVEIWSFDPNGGVMVVACGTISLKSTMGTAKSFCIPQDVRLVFVDKYYVLAGLRNGMLLRFEWPTESSHSSSINVDTALSSINLVNSMAEAFNVRNNLPCMLQLIAIRRIGITPVFLVPLDDTLDADIIALSDRAWLLHSARHSISYTSISFQPSSHVTPVCSIDCPKGILFVAENSLHLVEMVHSKRLNMRKFHLAGTPRKVLYHNESRMLLVMRTELSIGACLSDICCVDPLSGSVVSSFRMKQGETATSMALIRFRNEQVLVVGTSLYSGPPVISSGEAENAKGRLLVLSLVHVQNSDSGSMTFCSKAGSSSQKTSPFNETVGHVPEQLSSSSLGSSTDDNSSDCTKLDENEMWQFRSDYSTTWHGVVQAICPYLDRYFLASAGNTFYVCGFPNDTPERVKRYAAGKTRFMIKSLTACFRRIAVGDSRDGILFYSYHEEAKKLEQLYGDPSFRLVANCLLMDDNTAIVSDRKGSIAVLCSDHLEAPNNVRSECNLRISCAYFMAEIAVSIQKSSYSYRLPADDVLSGGIGFGPKTNVDPLQNTILACTLLGSIMIFIPLSRNNIVWVFNSVWFFFFDRLREEYELLEAVQARLVVHHLTAPVLGNDHDEFRSRENPDGVPKILDGDMLTQFLELTNMQQNSILSLEPPDDMLKPSSKPLLSQFSVNQVIQLLERVHYALN 1397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05519 1397 MobiDBLite consensus disorder prediction 1022 1059 - -
Vivi6g05519 1397 MobiDBLite consensus disorder prediction 1 26 - -
Vivi6g05519 1397 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 113 673 IPR018846 -
Vivi6g05519 1397 Gene3D - 1078 1234 IPR015943 GO:0005515
Vivi6g05519 1397 Gene3D - 506 902 IPR015943 GO:0005515
Vivi6g05519 1397 Pfam CPSF A subunit region 941 1350 IPR004871 GO:0003676|GO:0005634
Vivi6g05519 1397 MobiDBLite consensus disorder prediction 8 26 - -
Vivi6g05519 1397 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 35 1360 - -
Vivi6g05519 1397 Gene3D - 41 469 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05519 Vivi-Chr6 160841099 160865212 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05519 K12830 - gmx:100806799 2090.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05519 6 160841099 160865212 Vivi6g05519 6 160841099 160865212 ECH