Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05511 ATGATGCTCCGAATTCGAAGCCGTGACGGCCTTGAACGAGTAAAACTAGAAAACCCAAACGCCACAAAAATCTCCGACCTCAAATCCATAATTGAAAAACAATTGCGAATCCCCACTCACAACCAAACCCTCTCCACTAACCAAAACCTCTTACTCGCCAAATCCCTCGAAGATCTTCACCGATTCACCGATATGTCAAACCCTAACACTCCTTTATCAGCTTTAAACCTCTCCCACGGTTCAATCGTGTTTTTAGCCTACGAAGGCGAACGTAGGGTTCAGGGACCGGCAGCTTTTAGTCCTGCTGGTTCATTCGGTAAGAAGATGACCATGGATGATCTCATCGCGAAACAGATGCGGGTTGGGAGGCAAGAGAATCCGCATTGCGAAATTGTTTCGTTTGATCGCGATTGCGCTAACGCGTTTCAGCACTATGTGAATGAGACTCTGGCTTTTGCTGTTAAGCGAGGTGGGTTTATGTATGGGACTGTTTCTGAGGAGGGGAAGGTTGAGGTGAATTTTATATATGAGCCGCCGCAGCAAGGGTTGGAGGAGAATCTTATGTTTTTTAGGGATTCGGAGGAGGAGAAATATGTGGAAGCTATTGCGGCGGGGTTGGGGATGAGGAGGGTTGGGTTTATTTTTACTCAGAGTGTGAGTCAGGCGAAAAAGGATTATACTTTGTCGTATAGGGAAGTGTTGCAGGCGGCTGAGTATCATGCTGAGAGTGGTTTGAAGGAGTGGGTTACTGCGGTGGTGAAGCTTGAGGTGAATGAGGAAGCTGGTGGTGCTGATGTGCATTTTGAGGCTTTTCAGATGAGTGATGTGTGTATTAGGTTGTTTAAGGAAGGTTGGTTTGATATTGAGGTTAAGGAGGATCATGATCCTAAGTTGTCTGTGATGAAGAAGGATGTGGTTGTTGGGGTTAAGGATACTAAAGAGGTTGATAATGATTTCTTCTTGGTGGTTGTTAAAATCGCTGATCATCAGGGTCCTCTTTCATCAACATTTCCCGTTGAGAACCGGATAATTCAAGTGACTGCAAATGCGCTGAAGAATCATCTTGAACGGACTAAAAGTCTTCCATTTGTGAAACGAATTTCAGATTTTCATCTTCTTCTCGTACTATCAAGGGTTTTGGACGTGAATGCTGATGTTCCTGCATTGACAGAATGTGTACTGACACAGAGTGCTGTACCAGAAGGTTACCAGATCCTTATTGAGTCCATGGCTAGTGCTGCTTAG 1245 0.4498 MMLRIRSRDGLERVKLENPNATKISDLKSIIEKQLRIPTHNQTLSTNQNLLLAKSLEDLHRFTDMSNPNTPLSALNLSHGSIVFLAYEGERRVQGPAAFSPAGSFGKKMTMDDLIAKQMRVGRQENPHCEIVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVNFIYEPPQQGLEENLMFFRDSEEEKYVEAIAAGLGMRRVGFIFTQSVSQAKKDYTLSYREVLQAAEYHAESGLKEWVTAVVKLEVNEEAGGADVHFEAFQMSDVCIRLFKEGWFDIEVKEDHDPKLSVMKKDVVVGVKDTKEVDNDFFLVVVKIADHQGPLSSTFPVENRIIQVTANALKNHLERTKSLPFVKRISDFHLLLVLSRVLDVNADVPALTECVLTQSAVPEGYQILIESMASAA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05511 414 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 1 92 IPR016563 GO:0006511
Vivi6g05511 414 Pfam NPL4 family 158 231 IPR007717 -
Vivi6g05511 414 CDD MPN_NPL4 120 376 IPR007717 -
Vivi6g05511 414 CDD Ubl_AtNPL4_like 1 85 - -
Vivi6g05511 414 Pfam Nuclear pore localisation protein NPL4 1 85 IPR024682 -
Vivi6g05511 414 SUPERFAMILY Ubiquitin-like 1 89 IPR029071 -
Vivi6g05511 414 Gene3D - 1 101 - -
Vivi6g05511 414 ProSiteProfiles MPN domain profile. 131 277 IPR037518 -
Vivi6g05511 414 FunFam NPL4-like protein 1 1 101 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05511 K14015 - gmx:100811623 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05511 6 160718321 160725171 Vivi6g05511 6 160718321 160725171 ECH