Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05495 ATGAAGAAAGAGAATCAAACAGTGATCATTGTTGGAGCAGGCCCTTCCGGTCTCTCTGTCGCAGCATCCTTAACAAACCAATCCATTCCATACATAATCCTCGAAAGAGAAAACTGTTTCGCATCTCTATGGAAAAAATACTCATACGACCGTCTTCATCTTCACCTCAAGAAGCAATTCTGCGAGCTTCCACACAAACCATTCCCACCTTCTTATCCATCCTACATTTCCAAGCAAAAGTTTCTGCAGTATTTGGAAGACTATGTATCTTTCTTCAAGATCAATCCTGTTTATCATAGGACAGTGGTGAATGCGGAGTTTGATGAAGGTGGTGAGAAGTGGAAGGTGAGGGCTGTGAATAAGGTTTCTGGTGAAGTTGAGGAGTATGATGGGAGGTTTTTGGTTGTGGCTAGTGGTGAAACGAGTGACCCTTTTGTGCCGGAGATTGAAGGTTTGGAGAGATTTGAAGGGAAAGTGATGCATTCGACAGGGTTTAAGAATGGGAAAGAGTTTAAGGATGAACATGTTCTTGTTGTTGGGTCGGGGAATTCTGGTATGGAGATTGCTTTGGATCTTGTTAACCATGGTGCTAAAACTTCAATTGTTGTTCGAAGCCCGGTTCATATATTGTCAAAGGGAATGATTAATTTAGGGTTGTTTCTGATGAAGTATTTGTCAATGGAGATGGTGGATTCATTAATGGTGATGCTTAGTAAAATAGTTTATGGAGATATGACTAATTATGGGGTTGGTAGGCCTAATGAGGGACCTTTTTACATGAAAGTTAAATACGGCAAGTATCCAATTATTGATGTTGGTACCTATCAAAAAATCAAATCTAAAGAGTTAAAGGTGTTGCCAGGGGGAATAGAAAACTTAAGTGGCAAGAATGTGTTATTCAAGAATGGTGAATTGCATACTTTTGACTCTATTATTTTCTGCACTGGCTTCAAGAGATCAACAAATAAGTGGCTTAAGGGAGATGATTATCTTTTGAGTGATGATGGTATTCCGAAGCAAAGTTACCCTCTTCATTGGAAGGGAAAGAATGGTTTGTATTGTGTTGGATTGTCAAGGAGAGGTTTGTATGGTGCTGCTCAAGATGCTGAAAATGTAGCTAATGATGTTAGATTATCCATCATGCAAAAACCATACATGTCATGA 1164 0.3943 MKKENQTVIIVGAGPSGLSVAASLTNQSIPYIILERENCFASLWKKYSYDRLHLHLKKQFCELPHKPFPPSYPSYISKQKFLQYLEDYVSFFKINPVYHRTVVNAEFDEGGEKWKVRAVNKVSGEVEEYDGRFLVVASGETSDPFVPEIEGLERFEGKVMHSTGFKNGKEFKDEHVLVVGSGNSGMEIALDLVNHGAKTSIVVRSPVHILSKGMINLGLFLMKYLSMEMVDSLMVMLSKIVYGDMTNYGVGRPNEGPFYMKVKYGKYPIIDVGTYQKIKSKELKVLPGGIENLSGKNVLFKNGELHTFDSIIFCTGFKRSTNKWLKGDDYLLSDDGIPKQSYPLHWKGKNGLYCVGLSRRGLYGAAQDAENVANDVRLSIMQKPYMS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05495 387 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Vivi6g05495 387 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 193 - -
Vivi6g05495 387 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 6 378 - -
Vivi6g05495 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 7 29 - -
Vivi6g05495 387 PRINTS Pyridine nucleotide disulphide reductase class-II signature 171 195 - -
Vivi6g05495 387 SUPERFAMILY FAD/NAD(P)-binding domain 4 208 IPR036188 -
Vivi6g05495 387 Pfam Pyridine nucleotide-disulphide oxidoreductase 9 206 - -
Vivi6g05495 387 Gene3D - 1 382 IPR036188 -
Vivi6g05495 387 PIRSF FMO 4 360 IPR000960 GO:0050660|GO:0050661
Vivi6g05495 387 SUPERFAMILY FAD/NAD(P)-binding domain 173 377 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05495 Vivi-Chr6 160596307 160599471 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05495 K11816 - gmx:102668138 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05495 6 160596307 160599471 Vivi6g05495 6 160596307 160599471 ECH