Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05487 ATGGGAAGTCAATCTAAGGGGAGTGTGGATGGAGTTCAAAGTGATGTGAAGGTTGTAGAGAATATGTCAACTAAGAAGAGTGGTGTTTATGATTTGTTGCTTAGGGTTCTTTGTTTCTTGCTCACTCTCACTGTTACTATCATTGTTGCTGTTGATAAGGAAACTAAGGTTATTTCCTATGCTGATTTGCAGTTCAAAGCTACTGCTAAATGGAAATACATGTCTGCTAGTGTGTTTTTCTTGGTGACAAACGCTATAGGATGTTCATATGCAGCAACAACAATGGTGATTTCAACCATTGCAAGAAACAGTGGGAACAAGACAATACTGTTGATGATAACAGTACTAGATCTTGTTGTTTCTGCATTACACTTCTCAGCCAATGGAGCTGCTGCTGCAGTGGGAGTGTTAGGGCAGAAAGGAAACTCGCACGTGCAATGGATGAAAGTGTGTAATGTGTTTGATGCCTATTGTCGTCACATGACTGCTGCTTTGGTTCTCTCTATCATTGGTTCATCTGTGTTTCTTTTGCTTGTGGCTCTCTCTATTTTCAAACTTCATTATTATAGATCTTACTAG 579 0.3955 MGSQSKGSVDGVQSDVKVVENMSTKKSGVYDLLLRVLCFLLTLTVTIIVAVDKETKVISYADLQFKATAKWKYMSASVFFLVTNAIGCSYAATTMVISTIARNSGNKTILLMITVLDLVVSALHFSANGAAAAVGVLGQKGNSHVQWMKVCNVFDAYCRHMTAALVLSIIGSSVFLLLVALSIFKLHYYRSY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05487 192 Pfam Casparian strip membrane protein domain 28 172 IPR006702 -
Vivi6g05487 192 PANTHER CASP-LIKE PROTEIN 1U1 23 187 IPR044173 -
Vivi6g05487 192 NCBIfam plant integral membrane protein TIGR01569 32 185 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05487 Vivi-Chr6 160436384 160437441 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05487 - - psat:127125448 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05487 6 160436384 160437441 Vivi6g05487 6 160436384 160437441 ECH