Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05474 ATGGAGGATACCCAAGAAATTGATGAGGTACCAGAAGAAGTGATTTCCGATAAAACATCTGAAAAGGAGGAAGAAACTCGTGATGAGGTTCTTGCACGGCACAGGAAAGAGATATCACAACTGCAGAAAAAAGAAGTTGAAATGAAAAAGCAAGCAGCTAGAGGTAGCAAGGCTGAGCAAAAAACTAAGAAAAAGCAAGTGGAGGAAGAGGTTTCTCAGCTTTCTACTAAGCTCAAGGAGAAACATGCCAAAGAACTGTCTATATTAGGCTATAGCAGTGGTAACGGAAACGAAAAGAGCAATTTAGACAATTTGGTGAAGGCCATAGCTGGAGTAACTGTTAGTACTCAACCAGAGAATACAAAGGTTAGCAAGGCCAAACAGAGGCGTGACAAAAGAGCTCAACAAGAAGCAGAGAGGGAACTGAGAATCCAAGCAGAGCAGAATGACATTATAAGCGATCGCATGGTTGAAAATGAGAAACTAGAAAGGAAGTTGAAACCTCTTGGGTTGGCTGTTTGTGAAATAAAGCCTGATGGGCATTGCCTTTACAGAGCTGTTGAGAATCAGTTGGGCCACCTCTCTGGTGGTAAATCTCCATATACATACCAACAACTTCGACAACTGGCAGCTGCTTACATGAGAAAGCATACATCTGATTTCCTTCCATTTTGTCTGTCGGAGAATTTAATCGAAGGTGATTCCGATGAATCAATTGCTCAGAAGTTCGAAAACTATTGCAAAGAAGTAGAATCCACAGCAATATGGGGAGGACAACTAGAGCTCGGTGCCTTGACTCACTGTCTGAAGAAGCATATCGTCATTTTTTCAGGGTCCTTCCCTGACGTGGAGATGGGAAAAGAGTATAAACCGGTTGATGGTATTGGCTCGTCTAGTTCCAGTATCAAGCTTTCTTACCATAAGCATGCTTTTGGGCTTGGTGAGCATTATAATTCTGTGGTCTCAACATGA 972 0.4228 MEDTQEIDEVPEEVISDKTSEKEEETRDEVLARHRKEISQLQKKEVEMKKQAARGSKAEQKTKKKQVEEEVSQLSTKLKEKHAKELSILGYSSGNGNEKSNLDNLVKAIAGVTVSTQPENTKVSKAKQRRDKRAQQEAERELRIQAEQNDIISDRMVENEKLERKLKPLGLAVCEIKPDGHCLYRAVENQLGHLSGGKSPYTYQQLRQLAAAYMRKHTSDFLPFCLSENLIEGDSDESIAQKFENYCKEVESTAIWGGQLELGALTHCLKKHIVIFSGSFPDVEMGKEYKPVDGIGSSSSSIKLSYHKHAFGLGEHYNSVVST 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05474 323 MobiDBLite consensus disorder prediction 1 79 - -
Vivi6g05474 323 MobiDBLite consensus disorder prediction 123 140 - -
Vivi6g05474 323 MobiDBLite consensus disorder prediction 117 140 - -
Vivi6g05474 323 Coils Coil 31 84 - -
Vivi6g05474 323 PANTHER OTU DOMAIN CONTAINING PROTEIN 33 321 - -
Vivi6g05474 323 SUPERFAMILY Cysteine proteinases 135 322 IPR038765 -
Vivi6g05474 323 ProSiteProfiles OTU domain profile. 171 323 IPR003323 -
Vivi6g05474 323 CDD OTU_plant_OTU5-like 162 321 - -
Vivi6g05474 323 MobiDBLite consensus disorder prediction 11 79 - -
Vivi6g05474 323 Gene3D - 157 323 - -
Vivi6g05474 323 FunFam Cysteine proteinases superfamily protein 157 322 - -
Vivi6g05474 323 Pfam OTU-like cysteine protease 177 317 IPR003323 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05474 K18342 - gmx:100780620 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05474 6 160377353 160381390 Vivi6g05474 6 160377353 160381390 ECH