Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05466 ATGGGGAGAAGATGCTTTCGCCGAGGCTCGCCGTCGAGATGCACCTATCTTCTTATCAAGTGTCATGTTATGGAGGTTGAGTCTTTTGAGGATGAGGGGATTGCGAAATTGTTGAATGATGGGTTTGTTAGCATTAAGGTGGATCGTGAGGAGCGGCCGGATGTTGATAAGGTATACATGACGTATGTGCAGGCTTTGTATGGCGGAGGAGGTTGGCCCCTGACTGTGTTTCTTTCACCTGACCTGAAGCCTTTAATGGGTGGAACTTACTTTCCCCCTGAAGATAAATATGGCCGACCTGGATTTAAGACTATACTCAGAAAGGTAAAAGATGCTTGGGAAAGTAAGAGGGATATGCTAGTTAAGAGTGGAACATTTGCAATTGAACAGCTTTCTGAGGCATTGTCTACTAGTTCAGATTCTGGTAAATTGCCTGATGGTGTTTCTGACGAGGCATTACGTCTATGCTCAGAGCAACTCTCTGAGAACTATGATTCAGAGTTCGGTGGTTTTGGATCTGCTCCAAAATTTCCAAGACCGGTTGAGATCAACTTGATGTCTTACAACTCGAAAAAGTTGGAGGATACGGGAAAGTTAGATAGAGCTAAGGAAAGTCAGAAAATGGTTTTCTTTACATTACAATGCATGGCAAAAGGAGGCGTCCACGATCATGTTGGAGGGGGGTTTCACAGATATAGCGTGGATGAATGCTGGCATGTTCCACATTTTGAGAAGATGCTTTATGATCAAGGGCAGCTTGCTAATGCTTATTTAGATGCTTTTTCTATCACAAAAGATACCTTCTATTCATCTATATCACGGGATATCCTGGACTATTTGAGGAGAGACATGATTGGTCCAGAAGGTGAAATATTTTCAGCAGAGGATGCTGACAGTGCAGAGACCGAAGGAGCTACACGTAAAAAGGAAGGATCCTTCTACATATGGACCAGCGAAGAGGTTGAAGACTTACTTGGAGAGCATGCTGCTCTTTTTGAGGAACACTATTACATAAAAAAGGCGGGTAACTGTGACCTATCTGAAATGAGTGATCCTCACCATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAAAGGATCCTTCAGAAATTGCCTCAAAATATGGTATGTCAGTTGACACATATCAAGAAATTCTTGGAGAATGCAGGCGTAAGTTGTTTGAAGTAAGATTGAAGCGCCCCAAGCCACATTTGGATGATAAGGTTATTGTATCTTGGAATGGACTGGCAATCTCATCTTTTGCTAGGGCTTCTAAGATTCTAAAGGGTGAAGCTGAAGGGATCAAATTCAACTTTCCTGTTGTTGGCACTGAACCAAAGGAGTACTTGAGAATAGCAGATAAAGCAGCATCCTTCATTAGGAATCAACTTTACAATGCAGAGACTAACAGACTACAACACAGTTTCAGAAACTCTCCATCTAAAGCTCCTGGTTTCTTGGATGATTATGCTTTTCTGATTTCTGGGTTGCTGGATCTCTATGAATTTGGGGGTGGAATCAACTGGCTTTTATGGGCCATTGAATTACAGGAAACCCAGGATTCTTTGTTTCTTGATAAGGATGGAGGCGGATATTTCAACAATACAGGAGAAGATTCTTCAGTTCTTCTCCGTGTGAAGGAAGACCACGACGGGGCAGAACCGTCAGGGAACTCTGTCTCCGCAATAAATCTTATAAGGTTGGCTTCCGTGGTTTCTGGAAGTAAGGCAGATTACTATAAGCGAAACGCAGAACACCTATTGGCAGTTTTTGAGAAAAGATTGAAAGATATGGCCATGGCAGTGCCTTTAATGTGTTGTGCAACAGACATGCTGCGCGTGCCTTCCCGGAAGCAAGTGGTGGTGGTAGGCGAAAAGACTTCCGAGGAATTTGAAAACATGCTCGCTGCGGCTCACACATTATACGATCCCAACAGAACAGTTATTCATATAGATCCCAACTACAAAGAAGATATGGAATTTTGGGAAGTAAATAACAGCAATATTGCTCTAATGGCAAAGAATAACTCTGCAGTTGGCAAGGTTGTAGCTCTTGTATGTCAAAACTTCACATGTAGTGCCCCTGTGACTGATAGTTCATCACTTGAAGCTTTGCTCTCCCAAAAATTCTCCTCTTAG 2139 0.4268 MGRRCFRRGSPSRCTYLLIKCHVMEVESFEDEGIAKLLNDGFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLTVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWESKRDMLVKSGTFAIEQLSEALSTSSDSGKLPDGVSDEALRLCSEQLSENYDSEFGGFGSAPKFPRPVEINLMSYNSKKLEDTGKLDRAKESQKMVFFTLQCMAKGGVHDHVGGGFHRYSVDECWHVPHFEKMLYDQGQLANAYLDAFSITKDTFYSSISRDILDYLRRDMIGPEGEIFSAEDADSAETEGATRKKEGSFYIWTSEEVEDLLGEHAALFEEHYYIKKAGNCDLSEMSDPHHEFKGKNVLIERKDPSEIASKYGMSVDTYQEILGECRRKLFEVRLKRPKPHLDDKVIVSWNGLAISSFARASKILKGEAEGIKFNFPVVGTEPKEYLRIADKAASFIRNQLYNAETNRLQHSFRNSPSKAPGFLDDYAFLISGLLDLYEFGGGINWLLWAIELQETQDSLFLDKDGGGYFNNTGEDSSVLLRVKEDHDGAEPSGNSVSAINLIRLASVVSGSKADYYKRNAEHLLAVFEKRLKDMAMAVPLMCCATDMLRVPSRKQVVVVGEKTSEEFENMLAAAHTLYDPNRTVIHIDPNYKEDMEFWEVNNSNIALMAKNNSAVGKVVALVCQNFTCSAPVTDSSSLEALLSQKFSS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05466 712 Gene3D Glutaredoxin 15 140 - -
Vivi6g05466 712 Gene3D - 441 624 IPR012341 GO:0005975
Vivi6g05466 712 SUPERFAMILY Thioredoxin-like 21 114 IPR036249 -
Vivi6g05466 712 PIRSF UCP006402_thioredoxin 19 712 IPR024705 -
Vivi6g05466 712 SUPERFAMILY Six-hairpin glycosidases 158 553 IPR008928 GO:0005975
Vivi6g05466 712 FunFam spermatogenesis-associated protein 20 441 618 - -
Vivi6g05466 712 CDD SSP411 21 114 IPR004879 -
Vivi6g05466 712 Pfam Protein of unknown function, DUF255 21 130 IPR004879 -
Vivi6g05466 712 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 21 709 IPR024705 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05466 Vivi-Chr6 160281125 160286600 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05466 - - gmx:100777751 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05466 6 160281125 160286600 Vivi6g05466 6 160281125 160286600 ECH