Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05458 ATGAATCCTATTTGTTTTGATGGCAATAAACAAGACGGTGAAGTGAAATCTGGCGGAGGATTTCTTACTTCGGATGTTTCGGATATGGAAGATGAGTTTGGAGAGCCGGAAGTGGAGCCTCGTGTTGGAGACGAGTTCCAGGCGGAACTTCCTGAGTATATTGGGGCACCGTATCGGTCTCAGATTGTAAAGAAAACGGGAGATTCGGAAATTGCGGACAATGTGCCGGAGTCTTTTTTGTTTGGACTACCTCTTCCTCTTATGTGGACACATTGCGGATTCGACAGAAGTTGCGGTTTTGAGAGTTTAGAATATGTCGGAGGTCGAAAGGGGCATGTTATTTGTGAAGGAAAAAATGTAGGAGGGTTTTCGAATTTTAAATCCTCTTGTAGAAATGATGCGGAAGATATTGGCTCGGAACTGGGAACCGAACTAGAACCGCCAAGAGGCAGATATCTTCTTCCTGAATTGCTGTGTGGTCAGACTTGGACAGAGGTTGAATATAACAGTTTTCTTCTTGGCCTCTATGCATTTGGGAAGAGCCTTAATTTTTTGAAGAAATTCGTTGGGACGAAAAGTATGGGAGACATATTGTTTTTCTATTACGGTAAATTTTATAAGTCTAAAGGATATTCCCGATGGGCACAATGCCGGAAGTCGAAAACTAGGCGATGTATATTTGGACAGAAAATATTCACTGGTTGGAGGCAACAAGAATTGCTATCAAGACTGTTTTCCCATGTCGCAAAGGACTGTCAAACTCATTTGACTGAGATTTCAAAGAATTTTGGGGAGGGAAAGCTTCCATTTGAAGAATACGTATTTGCTCTAAAGAATGCTGTTGGCATTGAGGTCCTTATAGCTGCAGTAGGTATTGGCAAAGGGAAGCATGATCTTACAGGCACCGCTCTAGAGCCACCAAAGATCAATCACACCCTTCCTGTCCGCCATGAAATGCCAGCCGGAAAAGCTTGCTCCTCTCTTACATCTGCAGATATAATGAAGATCCTAAAAGGAGATTTTAGATTAAGTAAAGCTCGGTCTAGTGATCTTTTCTGGGAAGCTGTTTGGCCTCGTCTTTTAGCAAACGGTTGGCATTCTGAAGAGCCAAAGGATAATTTTGTTTCTGTAACAAAACAAACTCTGGTTTTTCTTGTACCCGGTGTTAAGAAGTTTTCAAGAAGGAAACTGGCCAAAGGTAACCAATACTTTGATTCTATAAGTGATGTACTGAATAAAGTGGCATCTGACCCTAGGCTTCTTGAGACTGAAGTTCAAACGAATGAGGGTAGTTCCGTTAACGAAAACATCCAAAACAATGGAAACCAAGATGGTGTGTCAAATACACATCAATGTCCTTTGTTTCAATCTCCCAGTTCAAAGTGCAAACCGGATCTCGTGAAATTTACAATTGTAGATACTAGCATGGCTCATGATACCGATCAACATAAAGTGAGACAAATGAAAAGCTTACCTTTTCAACCTGGGAATATATCTACCATCTCAAGCTGCAGTTCTAGTGAATCTGAGACAACTACATCTGAAGACTCGGAAGATCAGGTTGAACAAGCTAATCCTTCACAGCAAGCTGAAGATCGGGTTGAACAAGCTAATCCTTCACAGCAAGCTGAAGATCAGGTCGAACTTGCTAATTCTACATACCATGTTAAAGATCCGGATGAGAAAATCAATTCTTCGTACCGTATTGAAGATCAGGTTAAACTTGCTAATTCTTTGTACCGCATTGAAGATCAGGTTGAACATGCTAATTCTTCGTACCGTGTTGAAGATTATGTTGAGCACGCTAATTCTTCGTACCGTGTTGAAGATCATGTTGAGCAAGCTAATGCTTCAAACCCTATTGAAGGTCAGGTTGAGCAAGCTAATGCTTCAAACCCTATTGAAGGTCAGGTTGAGCAAGCTAATGCTTCAAACCCAATTGAAGGTCAGGTTGAACATACCAATTCTTCATACCACGTTGAACATGCTAATTCCTACAACCAAGTTGAAGAAATCTCAGATAAGGGGGCGTGCGAAAACTTATCAGGTCATACTCGTAATTTTGATCTGAATCAAGATGAGCATACAGAGGAGATGAGCGAGCAGACATTGATTCAAAAGCCGACATCTGATGATTGCAGAAAATATTTTCCCTGCACCGAAAAAATGCAGCAGTTAAGAGCTTGTAACCACGGGGAGTCTAGCCTTAGTGCTAAAAATACTTCTATGGACAGAAATTTTGATTTAAATGAGCCATTCTCACAGTCAGATCCACTTGAAGCATCTGAGGGCATGGATCTGTCTGTAGGTGTAGAAACTTTGTCTTCCCCAAGTTATCTGGCTAAAGGCAATCCTAACATGAGCAATGAAGGCAGTGTCACTATGAATCCCCAGGTTGGAGAAGTTTCTGCAGAAAATTCTGAAAACAGGATGTTGATTGACTTAAATTTTCCTCAAGTTGCTCCTGACTTAACACTTGAAACGGAAATACCGTCCTCTAAGGCGATACAGCAAAACGATGACCAACGTGCTCAAACATTGTCACCATCATCATCTGAGACAACCCAGCACAACGCAATAAATGAGATTCCTGATTTAAATAAGGAGCACCAACCGATCATTGTCAACCGCCGTCAAAGTACAAGGAACCGGCCGTTAACCACAAAGGCATTGGAAGCTCTTGAGTACGGATTTCTCAACTCAAAGAGGAAGAGGAAGAACTCAGAACCTTCAGACAACAATTCAAAGTCGCAATGTTTACGTCCAAGTAACGAGACAATTATCGGCGCTACTTGTGATGATAGCATTGAGAATTCTATTGCTGACACAAGTGCAAAGGAGGAGAATGTTATCCGGGAATATAATTTCATTGTTTAA 2877 0.414 MNPICFDGNKQDGEVKSGGGFLTSDVSDMEDEFGEPEVEPRVGDEFQAELPEYIGAPYRSQIVKKTGDSEIADNVPESFLFGLPLPLMWTHCGFDRSCGFESLEYVGGRKGHVICEGKNVGGFSNFKSSCRNDAEDIGSELGTELEPPRGRYLLPELLCGQTWTEVEYNSFLLGLYAFGKSLNFLKKFVGTKSMGDILFFYYGKFYKSKGYSRWAQCRKSKTRRCIFGQKIFTGWRQQELLSRLFSHVAKDCQTHLTEISKNFGEGKLPFEEYVFALKNAVGIEVLIAAVGIGKGKHDLTGTALEPPKINHTLPVRHEMPAGKACSSLTSADIMKILKGDFRLSKARSSDLFWEAVWPRLLANGWHSEEPKDNFVSVTKQTLVFLVPGVKKFSRRKLAKGNQYFDSISDVLNKVASDPRLLETEVQTNEGSSVNENIQNNGNQDGVSNTHQCPLFQSPSSKCKPDLVKFTIVDTSMAHDTDQHKVRQMKSLPFQPGNISTISSCSSSESETTTSEDSEDQVEQANPSQQAEDRVEQANPSQQAEDQVELANSTYHVKDPDEKINSSYRIEDQVKLANSLYRIEDQVEHANSSYRVEDYVEHANSSYRVEDHVEQANASNPIEGQVEQANASNPIEGQVEQANASNPIEGQVEHTNSSYHVEHANSYNQVEEISDKGACENLSGHTRNFDLNQDEHTEEMSEQTLIQKPTSDDCRKYFPCTEKMQQLRACNHGESSLSAKNTSMDRNFDLNEPFSQSDPLEASEGMDLSVGVETLSSPSYLAKGNPNMSNEGSVTMNPQVGEVSAENSENRMLIDLNFPQVAPDLTLETEIPSSKAIQQNDDQRAQTLSPSSSETTQHNAINEIPDLNKEHQPIIVNRRQSTRNRPLTTKALEALEYGFLNSKRKRKNSEPSDNNSKSQCLRPSNETIIGATCDDSIENSIADTSAKEENVIREYNFIV 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05458 958 MobiDBLite consensus disorder prediction 492 511 - -
Vivi6g05458 958 PANTHER ATROPHIN-RELATED 24 909 - -
Vivi6g05458 958 MobiDBLite consensus disorder prediction 518 546 - -
Vivi6g05458 958 MobiDBLite consensus disorder prediction 901 922 - -
Vivi6g05458 958 MobiDBLite consensus disorder prediction 480 546 - -
Vivi6g05458 958 MobiDBLite consensus disorder prediction 832 857 - -
Vivi6g05458 958 MobiDBLite consensus disorder prediction 425 452 - -
Vivi6g05458 958 SUPERFAMILY Homeodomain-like 161 209 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05458 Vivi-Chr6 160148079 160153363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05458 - - psat:127132703 1592.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05458 6 160148079 160153363 Vivi6g05458 6 160148079 160153363 ECH