Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05443 ATGGCTGCACCCAAACTACCACCACCTGATCATCATCCACAACTTCCTCCTCCATCAGAATCGAGTCTCAAGTATCAGACGTGGGTTTTGAAAGTCTTGATCCACTGCGATGGCTGCACAAAAAGAATCAAGAAAATTCTTCAAGGAATTGAAGGGGTTTACACGACAGAAGTTGATTCTATGCAGCACAAGGTTACAGTTACAGGCAACGTTGAAGCTGAAACTCTCATCAAAAAGCTTTCAAGATCAGGAAAATCAGTGGAACTTTTGCCACAAAAACCACCAGAGAAGAAAGATAAAAAACCTTCAACAAAATCAAAGGAAGAGATCAAGGAAGATCAAAAGAATAGTACTGAACCAGTTGGTGAAAGTGAAACTAGTCATGAAGATTGTATAGATGATGATGGTGGTGATGATGGTGGTGAAGAAGATTCAAATCATAATGATGGTGGTGATGGTGGGGGTGATAATAAAAGTGAAGGGGGTGCTAAAAAGAAGAAGAAAAAGAAAAAGAAGAATAAAAGTGGTGCTGTAACTTCTGCTCCTCTTAATAATAATGATGGAGGAGAAAAAGTGATTATTAGTACAGAAAAAGTTGATACTCCCAAGGAAATTATTGTCCCTCCAGTACTTCAACAACAGCATGGTTATGGTTATGGTTATAATAACCCATATCCACCACATATGTACTATTCACACCCTCCTATTGCTCATGCACCACCACCTTATGGGCTAAGCTATAACACATCCTATCCTGTTAATAGTACTTCTGGTTATTATGTTGGGGCTCCTATCATGCCTATGCATACTAATTACTCCAGAGTTCCTCCGCCTCCTCCTCCGCCGTCTGATCCGATTAATAACTATGGTTATCATCATGATCATGATGAATATGAAGGTGGATATTGCTCTATTATGTGA 921 0.3941 MAAPKLPPPDHHPQLPPPSESSLKYQTWVLKVLIHCDGCTKRIKKILQGIEGVYTTEVDSMQHKVTVTGNVEAETLIKKLSRSGKSVELLPQKPPEKKDKKPSTKSKEEIKEDQKNSTEPVGESETSHEDCIDDDGGDDGGEEDSNHNDGGDGGGDNKSEGGAKKKKKKKKKNKSGAVTSAPLNNNDGGEKVIISTEKVDTPKEIIVPPVLQQQHGYGYGYNNPYPPHMYYSHPPIAHAPPPYGLSYNTSYPVNSTSGYYVGAPIMPMHTNYSRVPPPPPPPSDPINNYGYHHDHDEYEGGYCSIM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05443 306 MobiDBLite consensus disorder prediction 1 20 - -
Vivi6g05443 306 MobiDBLite consensus disorder prediction 84 191 - -
Vivi6g05443 306 Pfam Heavy-metal-associated domain 34 85 IPR006121 GO:0046872
Vivi6g05443 306 ProSiteProfiles Heavy-metal-associated domain profile. 25 88 IPR006121 GO:0046872
Vivi6g05443 306 MobiDBLite consensus disorder prediction 177 191 - -
Vivi6g05443 306 MobiDBLite consensus disorder prediction 128 142 - -
Vivi6g05443 306 MobiDBLite consensus disorder prediction 91 127 - -
Vivi6g05443 306 Gene3D - 23 89 - -
Vivi6g05443 306 CDD HMA 34 88 IPR006121 GO:0046872
Vivi6g05443 306 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 22 306 - -
Vivi6g05443 306 MobiDBLite consensus disorder prediction 1 16 - -
Vivi6g05443 306 MobiDBLite consensus disorder prediction 143 162 - -
Vivi6g05443 306 SUPERFAMILY HMA, heavy metal-associated domain 25 90 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05443 Vivi-Chr6 160015111 160016573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05443 - - vvo:131612988 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05443 6 160015111 160016573 Vivi6g05443 6 160015111 160016573 ECH