Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05437 ATGTTAGACAAGCTTTTGGGAGCTCAAAGGGCCAGAAAATTCCACAGATTTCTCCGACATTGTAAGGTCACAATCCTCTGTCTTCTCCTCACCATTGTTGTCCTACGTGGCACTATCGGCGCCGGGAAATTCGGTACGCCGGAGCAAGATTTCGTCGACATTCGTAACCGATTCACCTCTCGTAAGCTACCTGAAACCCATCGCAGTCTCGCCGAGATTCATTCAACAACAACATCAACGTCTTCATCTTCTTCCTCTCGTTCAGACATTTCTACAAACAATTACAATGCATTTGATATTAATACAATATTGATCGATGAAGAGGAAGAACAAGAAGACAAAAAACCCAGCTCCGATAAGGCTTATCGTTTAGGACCGAAGATTTTGGATTGGGATAAGCAGAGATCAAAATGGCTTATTGAAAACCCTGATTATCCGAATTTCGTTCGACCTGGTAAGCCTCGTGTGCTTCTGGTAACTGGGTCGTCGCCGAAACCGTGTGAGAATCCGGTGGGTGATCATTACTTGTTGAAGTCTATTAAGAACAAGATTGATTATTGTCGTTTACATGGTATTGAAGTGTTTTACAATATGGCTCTTTTGGATGCTGAAATGGCTGGTTTTTGGGCGAAGCTTCCTTTGATTCGGAAGCTTCTTTTGTCACATCCTGAAGTGGAGTTTTTGTGGTGGATGGATAGTGATGCGATGTTTACGGATATGGCGTTTGAGGTTCCGTGGGAGAGGTATAAAGACTCGAATTTGGTGATGCATGGTTGGAATGAGATGGTGTATGATGAGAAGAATTGGATTGGGTTGAATACTGGGAGTTTTTTGTTGAGAAACTGTCAATGGTCGTTGGATATTCTTGATGTTTGGGCACCAATGGGACCGAAAGGGAAAGTTAGGGAAGAAGCTGGGAAGATACTTACGCGTGAGCTCAAAGATCGGCCGGTTTTTGAAGCGGATGATCAATCTGCTATGGTTTATTTGTTGGCTAAGGAGAAGGAGAAATGGGGTGATAAGGTTTATCTTGAGAATGGTTATTACTTGCATGGTTATTGGGGGATTTTGGTTGATAGATATGAGGAAATGATTGAGAAATATCATCCTGGTTTTGGTGATCATAGATGGCCATTGGTGACTCATTTTGTGGGATGTAAGCCTTGTGGGAAGTTTGGTGATTATCCTGTTGAGAGATGCTTGAAGCAGATGGATAGAGCTTTCAATTTTGGTGATAATCAGATATTGCAGATTTATGGATTCACACATAAGTCATTGGTTAGTAGGAGAGTTAGGAGAATAAGGAATGAGACTAGTAATCCTCTTGAGGTTAAAGATGAACTTGGTTTGCTTCATCCTAGTTTTAAAGCTGTTAAGGTATCTTCTTCTAGCTGA 1395 0.4172 MLDKLLGAQRARKFHRFLRHCKVTILCLLLTIVVLRGTIGAGKFGTPEQDFVDIRNRFTSRKLPETHRSLAEIHSTTTSTSSSSSSRSDISTNNYNAFDINTILIDEEEEQEDKKPSSDKAYRLGPKILDWDKQRSKWLIENPDYPNFVRPGKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNLVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDVWAPMGPKGKVREEAGKILTRELKDRPVFEADDQSAMVYLLAKEKEKWGDKVYLENGYYLHGYWGILVDRYEEMIEKYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLVSRRVRRIRNETSNPLEVKDELGLLHPSFKAVKVSSSS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05437 464 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 9 448 IPR008630 GO:0016020|GO:0016757
Vivi6g05437 464 Pfam galactosyl transferase GMA12/MNN10 family 153 392 IPR008630 GO:0016020|GO:0016757
Vivi6g05437 464 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 152 308 IPR029044 -
Vivi6g05437 464 FunFam xyloglucan 6-xylosyltransferase 2 152 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05437 Vivi-Chr6 159949608 159951975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05437 1 464 Glycosyltransferase AT3G62720 75.699 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05437 K08238 - gmx:100794266 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05437 6 159949608 159951975 Vivi6g05437 6 159949608 159951975 ECH