Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05436 ATGGAGTTGATGTGTCATTCTTCAACTTTTCTTCTTCCGCCGGAAAATCAAAACACCGCTTCGTCTTCTTCTTCCTCTTCTTCGTCGTCTTCTGTTTCTCTAACGTATGCTCTTGTTATTCTCAATCAAAATCTTCCCAAATTTACTCCTCTGCTTTGGGACCACGCATGTATACGAGTTTGCGCTGATGGAGGTGCCAACCGTGTGTTTGATGAAATGCCTCTTTTGTTTCCTCAACTAAATCCTTCTCATGTTCGCTCAAGGTACAAGCCTGATGCAATTAAAGGAGACATGGATTCAATCAGGACAGAAGTACTTGATTTCTATGCAAACTTGGGAACGAAGATAATTGATGAGTCTCAAGATCAGGACACCACAGATTTACACAAATGTGTTGCATACATACGTGACCTCGTACCAAATACGGATAAATCAGAACTATGCATCCTCGCTACTGGAGCACTTGGCGGGAGATTTGATCACGAGATGGGAAATATTAATGTGCTCTGTCGATTCTCCAACACACGTATTATCCTTCTATCTGATGATTGCCTCATTCATCTTCTTCCAAAGAATCACTCGCATAAGATCTTTATTCAATCTTCTCTTGAGGGTCCACATTGTGGACTCGTTCCCATCGGGATGCCATCAGGAAGTTCTACAACCACGGGACTCAAGTGGGATCTCAATGAAACAGAGATGAGATTTGGCGGTTTAGTAAGCACATCAAATGTTGTAAATGGAGATATAGTAACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCTATTAAGAAGCTCTAG 807 0.4139 MELMCHSSTFLLPPENQNTASSSSSSSSSSSVSLTYALVILNQNLPKFTPLLWDHACIRVCADGGANRVFDEMPLLFPQLNPSHVRSRYKPDAIKGDMDSIRTEVLDFYANLGTKIIDESQDQDTTDLHKCVAYIRDLVPNTDKSELCILATGALGGRFDHEMGNINVLCRFSNTRIILLSDDCLIHLLPKNHSHKIFIQSSLEGPHCGLVPIGMPSGSSTTTGLKWDLNETEMRFGGLVSTSNVVNGDIVTVQSDSDLLWTISIKKL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05436 268 SMART TPK_B1_binding_a_2_a 193 259 IPR007373 GO:0009229|GO:0030975
Vivi6g05436 268 CDD TPK 37 263 IPR007371 GO:0004788|GO:0005524|GO:0009229
Vivi6g05436 268 PIRSF TPK1 3 268 IPR016966 GO:0004788|GO:0005524|GO:0009229
Vivi6g05436 268 MobiDBLite consensus disorder prediction 1 29 - -
Vivi6g05436 268 PANTHER THIAMIN PYROPHOSPHOKINASE 4 266 - -
Vivi6g05436 268 MobiDBLite consensus disorder prediction 10 29 - -
Vivi6g05436 268 FunFam Thiamine pyrophosphokinase 34 176 - -
Vivi6g05436 268 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 35 185 IPR036759 GO:0004788|GO:0005524|GO:0009229
Vivi6g05436 268 Gene3D - 177 267 - -
Vivi6g05436 268 Pfam Thiamin pyrophosphokinase, catalytic domain 51 177 IPR007371 GO:0004788|GO:0005524|GO:0009229
Vivi6g05436 268 NCBIfam thiamine diphosphokinase 38 263 IPR006282 GO:0004788|GO:0006772
Vivi6g05436 268 Gene3D Thiamin pyrophosphokinase, catalytic domain 36 176 IPR036759 GO:0004788|GO:0005524|GO:0009229
Vivi6g05436 268 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 195 260 IPR007373 GO:0009229|GO:0030975
Vivi6g05436 268 FunFam Thiamine pyrophosphokinase 178 267 - -
Vivi6g05436 268 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 187 267 IPR036371 GO:0009229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05436 K00949 - gmx:100786303 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05436 6 159904608 159908595 Vivi6g05436 6 159904608 159908595 ECH