Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05433 ATGCAAACAATTACATCCATGGATGTCGAGGAACAACAACCTTCGCCAACACCCAGCAACGTTAAACACTTCGGTCTTAAAAACTCCATTCAAACCAATTTCGGCGACGACTATGTTTTCCAAATCATCCCTAAGGATGATTGGAGTTCAATGGCGGTTTCACTGTCAACGAATACAGTGAAACTGTATTCGCCAGTAATGGGTCAATATTATGGGGAGTGCAAGGGTCACTCTGCAACTATCAATCAGATTTTGTTTTCGGGTCCTTCTAATCCGCATGTTCTTAGCTCTTGTTCCTCAGATGGCACTATCAGAGCTTGGGACACAAGATCATTTCAGCAGGTTTCTATTCTCAATGCCGGTCCTTCTCAAGAAGTCTTTAGTTTCTCTACTGGAGGGCCTAATGGAAGTTTAGTTGCTGCCGGCTGTGATTCGCAGGTACTGTTATGGGATTGGAGAAATAACAAGCAAATTGCATGTCTAGAAGATTCTCATATGGATGATGTAACTCAGGTTCATTTTGTCCCTGATGAACCAGGCAGGCTCATTTCGGCTTCGGTAGATGGGTTGATCTGCATATTTGATACCAGTGGAGATATCAATGACGAGGATCATCTAGATTCAGTGATTAACGTGGGAACTTCAATTGCAAAGGTGGGTTTTTTTGGAGAGAGTTATCAGAAGCTTTGGTGTTTAACACATATTGAAACCGCGAGTATCTGGGATTGGAAAGATGGTAGAAATGAAGCAAACTTCTCAGACGCTCGTACTTTAGCTTCTGAAAGTTGGAATTTGGATCATGTTGACTATTTTGTTGACTGTCACTACTCGAAAGAAGCTGAAAAACTATGGTTAATCGGTGGCACAAATGCGGGTACTTTAGGTTACTTTCCTGTAAATTCCAGTGGAACGGCAACAATTGGAGCTGCAGAAGCAATTCTTGAAGGTGGCCATACAAGTGTTGTTAGAAGTGTTCTACCTATGTCCAGAATTCATAGCGAACTTGGTAGTAGTAGTAGTAGTCATGATCATAGCTCAGGCATTTTTGGATGGACAGGTGGGGAAGACGGAAGGCTATGTTGTTGGCTGTCCGATGATTCGCCTCAAAAAAATCAATCTTGGATTTCAAGTACATTGGTTATGAAACCAGAAAGAACTTGCAAGAAAAATCGTCATCAACCCTACTAA 1188 0.4192 MQTITSMDVEEQQPSPTPSNVKHFGLKNSIQTNFGDDYVFQIIPKDDWSSMAVSLSTNTVKLYSPVMGQYYGECKGHSATINQILFSGPSNPHVLSSCSSDGTIRAWDTRSFQQVSILNAGPSQEVFSFSTGGPNGSLVAAGCDSQVLLWDWRNNKQIACLEDSHMDDVTQVHFVPDEPGRLISASVDGLICIFDTSGDINDEDHLDSVINVGTSIAKVGFFGESYQKLWCLTHIETASIWDWKDGRNEANFSDARTLASESWNLDHVDYFVDCHYSKEAEKLWLIGGTNAGTLGYFPVNSSGTATIGAAEAILEGGHTSVVRSVLPMSRIHSELGSSSSSHDHSSGIFGWTGGEDGRLCCWLSDDSPQKNQSWISSTLVMKPERTCKKNRHQPY 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05433 395 Gene3D - 130 389 IPR015943 GO:0005515
Vivi6g05433 395 ProSitePatterns Trp-Asp (WD) repeats signature. 95 109 IPR019775 -
Vivi6g05433 395 Pfam WD domain, G-beta repeat 71 108 IPR001680 GO:0005515
Vivi6g05433 395 Pfam WD domain, G-beta repeat 126 151 IPR001680 GO:0005515
Vivi6g05433 395 PANTHER UNCHARACTERIZED 20 393 IPR039328 -
Vivi6g05433 395 Gene3D - 41 129 IPR015943 GO:0005515
Vivi6g05433 395 SMART WD40_4 67 108 IPR001680 GO:0005515
Vivi6g05433 395 SMART WD40_4 154 195 IPR001680 GO:0005515
Vivi6g05433 395 SMART WD40_4 111 151 IPR001680 GO:0005515
Vivi6g05433 395 ProSiteProfiles Trp-Asp (WD) repeats profile. 74 117 IPR001680 GO:0005515
Vivi6g05433 395 SUPERFAMILY WD40 repeat-like 36 364 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05433 K24758 - gmx:100794786 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05433 6 159858708 159861901 Vivi6g05433 6 159858708 159861901 ECH