Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05430 ATGGCTCAAACTCAGGAGAAGCAAGTGATGGTGGTTGGCATCGACGACAGCGATTATAGTACCTACGCTCTTGAATGGACTTTGGATCATTTGGTTGCACCAATACCAAATCCAATCTTCAAACTTGTTCTTGTTTATGCCAAACCTTCTGTTAGTGCTAGTGTTGGATTTGTTGGACCTGGAGCTTCTGAGGTGTTGCCTATTGTGGACGCCGATTTGAAAAGAACTGCTGTGTTGGTTATCGAACGAGCTAAAGAAATCTGCACGAAAAGATCGGTAAAAGACATAGTAGTCGAAACGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTGGAAAAGCACCATGCTTCAACATTGGTTGTTGGTAGTCATGGTTATGGAGCTATAAAAAGGGCGGTTTTAGGGAGTGTAAGTGACTATTGTGCTCATCATGCTCATTGCACTGTGATGATTGTGAAGAAGCCAAAACACAAACATTGA 486 0.4259 MAQTQEKQVMVVGIDDSDYSTYALEWTLDHLVAPIPNPIFKLVLVYAKPSVSASVGFVGPGASEVLPIVDADLKRTAVLVIERAKEICTKRSVKDIVVETVEGDPRNVLCDAVEKHHASTLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKHKH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05430 161 CDD USP_Like 10 154 - -
Vivi6g05430 161 Gene3D HUPs 1 161 IPR014729 -
Vivi6g05430 161 PRINTS Universal stress protein signature 7 25 IPR006015 -
Vivi6g05430 161 PRINTS Universal stress protein signature 115 127 IPR006015 -
Vivi6g05430 161 PRINTS Universal stress protein signature 133 155 IPR006015 -
Vivi6g05430 161 Pfam Universal stress protein family 9 155 IPR006016 -
Vivi6g05430 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 157 - -
Vivi6g05430 161 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 4 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05430 Vivi-Chr6 159829534 159830963 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05430 - - gmx:100306046 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05430 6 159829534 159830963 Vivi6g05430 6 159829534 159830963 ECH