Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05425 ATGGATTTAGAGTTTCAATATCAAGAAGAGTTCTGGAGAAACTCAAGAGGAGTGCAACTATTCACCTGCAAATGGTTGCCATTGTCTTCTCCAAAAGCTCTGGTTTTTCTTTGCCATGGTTATGGTATGGAATGCAGTCGTTTCATGAGAGAATGTGGAGTGAGGCTAGCTTGTGCTAGATATGCTGTGTATGGTATTGATTATGAAGGACATGGACGTTCTGAAGGGGTTCGATGTTACATTAAGAACTTCAATAACCTTGTTAATGACTGCTATGATTTTTTCAAGTCAGTTTCTGTGCTCCATGAGTATAAGGGAAAGACTAGGTTCTTGTATGGAGAGTCCATGGGTGGAGCAGTTAGCCTTCTCTTGCATCAGAAGGACCCTTCTTTCTGGGATGGCGCAGTTCTTGTTGCGCCCATGTGTAAGATATCAGAGAAGGTGAAGCCACACCAAGTGGTCATCAACATATTGACTAAAGTAGAAGATATCATACCAAAGTGGAAGATTGTTCCAACAAAAGATGTCATCAATTTAGCCTTCAAAGATCCAGCTAAACGAGAAAGGATAAGAAAAAACAAGTTGATATATCAGGATAAACCCAGGTTAAAAACCGCATTAGAAATGTTAAGAACCAGCATGAGTCTTGAAGACACATTATACAAGGTGACACTGCCTTTTTTTGTAATGCATGGAGAGACAGACACAGTGACAGATCCAGAAGTAAGCAGAGCATTATATGAGAGAGCTAGTAGCAAAGATAAGACCTTTAAATTGTATCCGGGAATGTGGCATGGTTTAACATCCGGCGAGCCTGATGATAACATCGAAAAGGTCTTTGAAGACATTATCACATGGCTAGACAAACATGCTAACAGTAAAAGTGTTGCTCTTGACTCTTCAAATCCAACAATTGAGGCTTATGACTACGACATTGAGAAATCGACACCAGTTGTATCATCAGCAAACACTAGTATGAAGCTTACTCGTCCGCGAAAAAGTTATCTTTGTGGATTGAAAGGAAGTAGTTCGTTACATCACTCGGCAAATTAG 1053 0.4008 MDLEFQYQEEFWRNSRGVQLFTCKWLPLSSPKALVFLCHGYGMECSRFMRECGVRLACARYAVYGIDYEGHGRSEGVRCYIKNFNNLVNDCYDFFKSVSVLHEYKGKTRFLYGESMGGAVSLLLHQKDPSFWDGAVLVAPMCKISEKVKPHQVVINILTKVEDIIPKWKIVPTKDVINLAFKDPAKRERIRKNKLIYQDKPRLKTALEMLRTSMSLEDTLYKVTLPFFVMHGETDTVTDPEVSRALYERASSKDKTFKLYPGMWHGLTSGEPDDNIEKVFEDIITWLDKHANSKSVALDSSNPTIEAYDYDIEKSTPVVSSANTSMKLTRPRKSYLCGLKGSSSLHHSAN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05425 350 FunFam Alpha/beta-Hydrolases superfamily protein 2 294 - -
Vivi6g05425 350 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Vivi6g05425 350 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Vivi6g05425 350 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Vivi6g05425 350 Gene3D alpha/beta hydrolase 4 298 IPR029058 -
Vivi6g05425 350 PANTHER PHOSPHOLIPASE-RELATED 11 290 - -
Vivi6g05425 350 Pfam Serine aminopeptidase, S33 30 272 IPR022742 -
Vivi6g05425 350 SUPERFAMILY alpha/beta-Hydrolases 6 290 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05425 Vivi-Chr6 159752326 159755845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05425 48 339 Acyl Lipid Metabolism Gene Families AT2G47630 65.870 1.51e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05425 K18368 - qsa:O6P43_010779 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05425 6 159752326 159755845 Vivi6g05425 6 159752326 159755845 ECH